KEGG   Chondrus crispus (carragheen): CHC_T00003885001
Entry
CHC_T00003885001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHC_T00003885001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccp03041]
    CHC_T00003885001
Spliceosome [BR:ccp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    CHC_T00003885001
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 17322850
NCBI-ProteinID: XP_005715138
UniProt: R7QB68
LinkDB
AA seq 186 aa
MANKTDTYALHSRGTDPQNLLEPSLRHSVYLSRFWNESCFGVTLADVVPLAARLDRISAV
TAPPTPFLCLLLKLLQLSPEEPEIAVFLTQNDFKYARLLGAFYVRLALPPPRVYALLEPL
LADLRKIVVREGASAEHAIVHVDELIDRLLREHLVVGITLPRLPPRHVVEESFVQLPPRP
QLLQGL
NT seq 561 nt   +upstreamnt  +downstreamnt
atggcgaacaagacagacacctacgccctgcactcgcgcggcactgatccgcagaatctc
ctggagccatcgctccgccacagcgtgtacctctcgcgcttctggaacgaatcctgtttc
ggcgtgacactagccgacgttgttcccctcgccgctcggcttgaccgtatctctgccgtc
accgcccctcccaccccctttctctgcctcctcctcaagctgctacagctctcccccgag
gagcccgagatcgccgtgtttcttacgcaaaacgactttaaatacgcgcgcctgctcgga
gccttctacgtgcggctcgccctaccgcccccacgcgtatatgcattgcttgagccgttg
ctggcggacttacggaagatcgttgttagagaaggagcatccgcggagcatgctatcgtt
catgtcgatgagctcatcgaccgcctcctgcgagaacatctcgttgttggcatcacgctg
ccgcgcttaccgcccaggcatgtcgtcgaggagagctttgtccagctgccacctcgacct
cagcttctgcaaggcttgtag

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