Chondrus crispus (carragheen): CHC_T00003930001
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Entry
CHC_T00003930001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14791
periodic tryptophan protein 1
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00003930001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
90S particles
Other 90S particles
CHC_T00003930001
Pre-60S particles
Other pre-60S particles
CHC_T00003930001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_RFWD3
Beta-prop_EIPR1
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
NBCH_WD40
WD_LRWD1
Beta-prop_Aladin
WD40_like
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_WDR41
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
17322807
NCBI-ProteinID:
XP_005715095
UniProt:
R7QCW6
LinkDB
All DBs
AA seq
491 aa
AA seq
DB search
MAVTESGRGNGEQKSGPQPSSDMEVDDDDSEVDIASILANDLDTLSFHKKNEDDPYLTSD
PAAKEIFDEEEMEDLVIRPTDALIIAAKSGDDASTLEVHLFDDDPDDSDSEEGAYLPHTY
VHHDLVLPVLPLCTAYTNLAIDGESLNLVAVGMFTPGIDIWDVDRVNDLEPVISLGGYDK
YLDSSSSKGSTGRNQKKKKPRLRLKEDSHKDAVMCLSWNNVQKEYLVSGSADFTVKIWDI
ESAHCASTLDHHKDKVQSVAFHPTKLELLLSGSFDKTVHLVDIRDSNKNRNWKVEADVER
VQWGEGTTNSMVFVTTEDGYTTVFDTRKSGQDKHLARWQAHQGAATALSISQDIPGLLVT
GGVDKMVKVWDVSGVNHGKSGELVYERPSKAGALFALSLCPLPEYETNASPFVVAYGGAQ
GTLRVVDLAVESEAVRDRFVRHCQPKSTAAILKRSARQKQALRSEGSTIHASATSEDIDG
DNSDSESDHET
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcaccgaatccgggcgtggtaatggagaacagaaatcaggcccccagccaagt
agcgatatggaagtggacgacgatgattcggaagtggatattgcgtcaatactagcaaat
gatttggatactctttcttttcacaagaagaacgaagacgacccgtacctgacatccgac
cccgcagccaaggaaatatttgatgaagaagaaatggaggatttggttatccgccctaca
gatgcactcatcattgccgccaagtcgggagatgatgcgtcgactcttgaagtgcatttg
ttcgacgacgaccctgatgattccgattcagaggaaggtgcatacttgccgcacacttac
gttcatcatgaccttgtgctcccggttttgccattgtgcactgcgtatacgaaccttgca
attgatggcgaatctctgaacctcgttgccgtgggtatgttcacacctgggattgatatc
tgggatgtcgatcgagtcaatgatttagaacctgttatatctttgggaggttatgacaag
tacttggacagctcatcgagtaaaggaagcacgggtcgaaaccagaagaagaaaaagccc
agattgcgactgaaagaagattctcacaaagatgccgtcatgtgtctatcttggaataat
gtgcaaaaagagtacctcgtcagtgggtcggcagatttcacagtgaaaatctgggacatt
gaatccgcccattgtgctagtactcttgatcatcacaaggacaaagtgcaatctgtggca
tttcacccgacgaagttagagctgttgctttccggctcattcgacaaaacggtacacttg
gtagacatccgcgacagtaacaaaaacagaaactggaaagtagaagcggacgtcgagaga
gttcagtggggagagggaaccacgaacagcatggtgtttgttaccactgaggacggatat
actactgttttcgatacacgaaagtcagggcaagataagcatctagcaaggtggcaagca
catcaaggggcggcgacggcactatcgatttcccaagatattccaggtctcttggtgacg
ggaggtgtagacaagatggtgaaggtttgggatgtttccggggtgaatcatgggaaatcg
ggtgaactcgtttatgagagaccgtccaaggctggggctttattcgctctatctctgtgt
cctctgccagagtatgaaacgaatgcttcaccatttgtggtcgcctacggtggcgcgcaa
ggcacgctgcgagtggtggatcttgctgtcgaaagcgaagcggtccgtgaccgctttgtt
cgccactgtcaaccgaagtctactgcagcaatattgaagcggtccgcacggcaaaaacaa
gctttgcgttctgaaggaagcacgatacatgcaagcgccactagcgaggacatagacgga
gacaactcagactcagagagtgatcacgaaacttag
DBGET
integrated database retrieval system