KEGG   Chondrus crispus (carragheen): CHC_T00003930001
Entry
CHC_T00003930001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K14791  periodic tryptophan protein 1
Organism
ccp  Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccp03009]
    CHC_T00003930001
Ribosome biogenesis [BR:ccp03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    CHC_T00003930001
  Pre-60S particles
   Other pre-60S particles
    CHC_T00003930001
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_RFWD3 Beta-prop_EIPR1 WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_WDR75_1st NBCH_WD40 WD_LRWD1 Beta-prop_Aladin WD40_like Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_WDR41 MIOS_WD40
Other DBs
NCBI-GeneID: 17322807
NCBI-ProteinID: XP_005715095
UniProt: R7QCW6
LinkDB
AA seq 491 aa
MAVTESGRGNGEQKSGPQPSSDMEVDDDDSEVDIASILANDLDTLSFHKKNEDDPYLTSD
PAAKEIFDEEEMEDLVIRPTDALIIAAKSGDDASTLEVHLFDDDPDDSDSEEGAYLPHTY
VHHDLVLPVLPLCTAYTNLAIDGESLNLVAVGMFTPGIDIWDVDRVNDLEPVISLGGYDK
YLDSSSSKGSTGRNQKKKKPRLRLKEDSHKDAVMCLSWNNVQKEYLVSGSADFTVKIWDI
ESAHCASTLDHHKDKVQSVAFHPTKLELLLSGSFDKTVHLVDIRDSNKNRNWKVEADVER
VQWGEGTTNSMVFVTTEDGYTTVFDTRKSGQDKHLARWQAHQGAATALSISQDIPGLLVT
GGVDKMVKVWDVSGVNHGKSGELVYERPSKAGALFALSLCPLPEYETNASPFVVAYGGAQ
GTLRVVDLAVESEAVRDRFVRHCQPKSTAAILKRSARQKQALRSEGSTIHASATSEDIDG
DNSDSESDHET
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggctgtcaccgaatccgggcgtggtaatggagaacagaaatcaggcccccagccaagt
agcgatatggaagtggacgacgatgattcggaagtggatattgcgtcaatactagcaaat
gatttggatactctttcttttcacaagaagaacgaagacgacccgtacctgacatccgac
cccgcagccaaggaaatatttgatgaagaagaaatggaggatttggttatccgccctaca
gatgcactcatcattgccgccaagtcgggagatgatgcgtcgactcttgaagtgcatttg
ttcgacgacgaccctgatgattccgattcagaggaaggtgcatacttgccgcacacttac
gttcatcatgaccttgtgctcccggttttgccattgtgcactgcgtatacgaaccttgca
attgatggcgaatctctgaacctcgttgccgtgggtatgttcacacctgggattgatatc
tgggatgtcgatcgagtcaatgatttagaacctgttatatctttgggaggttatgacaag
tacttggacagctcatcgagtaaaggaagcacgggtcgaaaccagaagaagaaaaagccc
agattgcgactgaaagaagattctcacaaagatgccgtcatgtgtctatcttggaataat
gtgcaaaaagagtacctcgtcagtgggtcggcagatttcacagtgaaaatctgggacatt
gaatccgcccattgtgctagtactcttgatcatcacaaggacaaagtgcaatctgtggca
tttcacccgacgaagttagagctgttgctttccggctcattcgacaaaacggtacacttg
gtagacatccgcgacagtaacaaaaacagaaactggaaagtagaagcggacgtcgagaga
gttcagtggggagagggaaccacgaacagcatggtgtttgttaccactgaggacggatat
actactgttttcgatacacgaaagtcagggcaagataagcatctagcaaggtggcaagca
catcaaggggcggcgacggcactatcgatttcccaagatattccaggtctcttggtgacg
ggaggtgtagacaagatggtgaaggtttgggatgtttccggggtgaatcatgggaaatcg
ggtgaactcgtttatgagagaccgtccaaggctggggctttattcgctctatctctgtgt
cctctgccagagtatgaaacgaatgcttcaccatttgtggtcgcctacggtggcgcgcaa
ggcacgctgcgagtggtggatcttgctgtcgaaagcgaagcggtccgtgaccgctttgtt
cgccactgtcaaccgaagtctactgcagcaatattgaagcggtccgcacggcaaaaacaa
gctttgcgttctgaaggaagcacgatacatgcaagcgccactagcgaggacatagacgga
gacaactcagactcagagagtgatcacgaaacttag

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