Chondrus crispus (carragheen): CHC_T00003943001
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Entry
CHC_T00003943001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHC_T00003943001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccp01009
]
CHC_T00003943001
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00003943001
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00003943001
Protein phosphatases and associated proteins [BR:
ccp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
CHC_T00003943001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
CHC_T00003943001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
CHC_T00003943001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_5
EF-hand_1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
17322963
NCBI-ProteinID:
XP_005715246
UniProt:
R7QA80
LinkDB
All DBs
AA seq
996 aa
AA seq
DB search
MNGKEANKSGVSPTSGSQYILGTSISPSTHQAALPRIALEWGSPTLRSLPSPPVVLITNS
DCAAWPKFKLDQLFVEWLARPESRKWLMGLLDDVRAGKTPDIGAEQTSRIMRTERSLSPS
LSRSPSAAAPSGLAASSQQAPGSPVSRLFRNHIPFGDSDSSPHSPPNAPPGVLSSFRPSL
TPAAADFDLGRSGSASPLENEQSHAKDRNSVASMKRTVSAAHKNSLSTSATGAGGRPMEA
GLDSRTPSALTGAVSSPSEECVRRPAADSKALDRVADGIAGMTAAAGRDQAPVQGSGGGR
DATAFSRADGESLHNKALSVLSEEKAASAVASSAHGSTESTSVRGSKPGSTKTSVEKGTT
VGQGRLEQRGSHANDSYTAIQPDSIPAEALAARTAQTTSLGSSQNELHETLGKATALDSG
VSPMDEGLVSSATPPLKPRSVPQKDTSMTDATTLQKKMKSIPRFYFPCGKDAEERESKER
QTIIDFFQSHRVQKNAHGVSRAEIAELVAEAIGLPSYFASIVFNAILELFPQASAERTRQ
TPDDQLDVSAPQNEETAMRDVIQRDSGAGQVSIASSVDATPSRNETGGTSSDTTMGDVND
MHTDGRRVNGFHASSGAQGDSTPTAEPATAGEGNAVGATQGCTGNETIEENQFTAYYNKI
AANSSREARLFAALREPHANRDYLIPSDFKPLLRALLLCHQGLAFLHATPEFQQRYSETV
IERIYFGCTRQHNGRLTLTDIKRSKLLETLIHVDEEEDINRERKYFSYEHFYVLYCRFWE
LDANHDLQIDREDLMRYGSHSLTYRIVDRIFGGYARPLDCPENPGFMSYTDFIWFCLSEE
DKTSDTAIDYWFRCVDMDGDGLITMYDMEFFYTEQLHRMECFGHEPVQIRDILCQLLDMI
NPNVKPPVIRRRDLKKCKLAGNFFNVLFNLNKFFAIEARDPLQIRQEHATPDLTDWDRFA
ALEYLRLSAEEEGEEDESWEDVCEAANPLMAGEAPF
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggaaagaggccaacaaatcaggtgtctctccaacgtccgggtctcaatacatt
ttggggacatcaatttcgccatcaacgcatcaggctgcattgcctcgaatagccctagaa
tggggctcccctacgctgagatcgttgccttcccctcccgtcgttcttattacaaattcg
gattgtgctgcatggccaaagtttaagcttgatcagctgtttgtcgaatggctcgcacgc
ccagaatcgcggaaatggctcatggggctcctggatgatgtccgggcaggcaagacccca
gacattggagcagaacagacaagtcgtataatgcggacggagcgctctttatccccgagt
ctatctcgatcaccatcggccgcagcaccttcaggtcttgctgcatcttcccagcaagct
ccaggttcgcccgtctcccgcctttttcgaaatcatattccatttggagactcagattca
tctccacattcacctccaaatgcgccacccggcgttctatcgtcgttccgcccttccttg
actccagcagctgcagactttgacctgggcagaagtggttcagcgtcgcctcttgaaaat
gagcagtcacacgcgaaggatcggaactcggttgcttctatgaagagaacagtttccgca
gcgcacaagaacagcctctctacgtctgccacgggagcagggggacgtccgatggaagca
ggactggatagcaggactccgtcggctctcactggcgccgtatcatctccttcggaagag
tgcgttcgccggcctgcagcagacagtaaagcactggaccgtgtggcagatggtatagca
gggatgaccgctgccgctggcagagaccaagcgcctgttcaaggatcaggaggcgggcgt
gatgcaacggcgttcagcagagcagatggagagtcattgcacaataaagcgcttagtgtc
ttgtcggaagaaaaagctgcaagcgcagtggcttcctcggcacacggttccacagagtct
acatcagtcagaggctctaagccgggatccacaaagacctcagtggaaaaaggaacgacg
gtcggacaaggtcgtttagagcagagaggaagtcatgcaaatgatagctatacagcaatt
cagccagactcaataccggctgaagctcttgcagcaaggacggcgcaaacgacttcttta
gggtcatcacaaaacgagctgcatgaaacgctcgggaaggcaacggccctcgatagtggg
gtatcgccaatggatgaaggcctcgtttcctccgcgacgccacccctaaaaccccgttct
gtgccgcaaaaggatacctccatgacggatgcaacaacccttcagaagaaaatgaagtct
attcccaggttttattttccatgcggcaaagatgcggaagaaagggaaagcaaagaacgc
cagactattattgacttttttcagagccatcgggtgcagaagaatgcgcatggagtcagt
cgcgccgagatcgcggagctggtcgcggaagcaattgggctcccgtcgtacttcgcatcc
attgtattcaatgctattctggagttgtttcctcaagcaagtgctgaacggacacggcaa
actccggacgatcagctggacgtatctgcgccacagaacgaggaaactgccatgcgcgac
gtcattcaacgagatagcggtgccggacaagtcagcattgctagttcagtggacgcgaca
ccctccagaaatgaaaccggcggaacgagctctgataccacgatgggggatgttaacgat
atgcatacagatgggcggcgagtgaatggatttcacgccagctccggagcccagggcgac
tcgacaccaaccgctgaacctgccaccgcgggcgaaggcaacgcggtaggggcaacgcag
ggttgcactggtaacgaaactatcgaggaaaatcagtttactgcgtactacaacaagatt
gccgcaaactcctcaagggaagcacgactttttgcagcattgcgagaaccacatgcaaat
cgagattatttgatcccaagtgactttaagccactcttgcgtgcattattgctttgccat
cagggacttgcgtttctgcacgccaccccagagtttcagcagagatattctgaaacggtc
attgagagaatttacttcggctgcacgcgacagcacaacggaaggctgactttaaccgat
atcaagcgatcgaagctgcttgaaaccctgatacacgtcgatgaagaagaagacatcaac
cgagaacgcaaatacttcagctacgaacatttttatgttttgtattgtcgtttttgggag
ctggatgccaaccatgacctgcaaattgatagggaagatttaatgcgatatgggagtcac
tccctcacgtatcgcatcgttgaccgtatctttggtggctatgcacgtcctctagactgc
ccagagaatcctgggttcatgtcttacacagatttcatttggttttgccttagcgaagag
gacaagacgagtgatactgcaatcgactactggttccgttgtgttgatatggacggtgac
ggactcataacaatgtatgacatggaatttttctacacggagcagctgcaccgcatggag
tgcttcggtcacgaaccagtccaaatacgagatattctatgccagttgcttgacatgatc
aaccccaacgtaaaaccccctgtaatcagaagaagggacttgaaaaagtgcaagcttgcc
ggcaacttcttcaacgttctcttcaatctgaacaaatttttcgcgattgaagcaagggac
cccctgcagattcgacaagaacacgcaactccagatttgacggattgggatagattcgca
gctttggaatatcttcgtttgagtgctgaggaggaaggggaagaggatgaatcttgggaa
gatgtctgtgaggcagccaatccgctcatggctggagaggctcctttctga
DBGET
integrated database retrieval system
