Chondrus crispus (carragheen): CHC_T00003979001
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Entry
CHC_T00003979001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00906
Carotenoid biosynthesis
ccp01100
Metabolic pathways
ccp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CHC_T00003979001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
CHC_T00003979001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
17323002
NCBI-ProteinID:
XP_005715292
UniProt:
R7QCJ6
LinkDB
All DBs
AA seq
424 aa
AA seq
DB search
MSLAAGLGQRGVHVLCADIHLDKPWPNNYGTWVDELQPLGLADCASHVWNRTAAYVRDDG
RKSNLDRPYARVDRHKMKRRFLDRCQSSGNVVVVKAVAKEVDVEGERSASTVRLVMHGGE
EVCVETRVVVDATGHSLNFVKFNQGKTPGFQAAYGVECVVSDKGYPFDNDEMLLMDFRDD
HMQQSPEDRHTANTTPTFIYVMPLDDGAGRHVFFEETSLVASPAMDFDHLKQRLYKRLAH
YNIHVDEVLEEEFCLIPMGGEMPVLRQRVVAFGGAAALVHPATGYMIARALELADKAAEI
IAAELRASHADADETAHRIWDRLWNVGRRRQRDFFNFGGEYLQRIDLRTTRDFFAAFFDL
PKDQWSAFLSFRLMQPLERLTFGLGVFARTTNRVRTSIVYDAITKGRFPLLMSVLPVYDV
EDET
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggccgcggggctcggccagcgcggcgtccacgtcctgtgcgccgacatccac
ctcgacaagccctggcccaacaactacggcacctgggtcgacgagctgcagccgctcggc
ctcgccgactgcgcgtcccacgtgtggaaccgcaccgccgcctacgtcagggacgatggt
cgcaagtctaacttggacaggccgtacgctcgcgtcgatcgacacaagatgaagagacgc
ttcctggataggtgccagagctccggtaatgttgtcgttgtgaaggccgtggctaaggag
gtcgatgtcgagggggagcggagcgcgagtaccgtcaggctcgtcatgcatggcggcgag
gaggtttgcgtcgagactcgtgtcgttgtggatgccacggggcatagcttgaactttgtc
aaatttaatcaggggaagaccccgggctttcaggccgcctatggcgtcgagtgtgtcgtg
agtgataaggggtatccgtttgataacgacgagatgctgctcatggattttagagatgac
cacatgcaacaatcaccggaggaccgccacaccgcgaataccaccccaacgtttatctat
gtcatgccgctggacgacggcgcaggccgccatgtctttttcgaggagacctcgctagtt
gcgtcgccggccatggactttgaccatctcaagcagcgcctgtacaagcgtctggcccat
tacaacattcacgtcgacgaggtgctggaggaggagttctgcctcattccgatggggggc
gagatgccggtcctgcgccagcgcgtggtcgccttcggcggcgcagccgccttggtgcac
ccggccacgggctacatgatcgcacgcgcgctcgagcttgcggacaaggctgcggagatc
atcgccgccgagcttcgtgcgagccacgccgacgccgacgagacggcccaccggatatgg
gaccgcctgtggaacgtcggccgccgaaggcagcgcgacttcttcaactttggcggcgag
tatctgcagcggatagacttgcgcacgacgcgcgacttttttgcggcctttttcgacctg
cctaaggaccagtggtccgccttcctctcgttccgcctcatgcagccgctggagcgcctc
accttcggcctcggcgtcttcgcccgcaccaccaaccgcgtccgcacctccatcgtctat
gacgccatcacaaagggccgcttcccgctcctcatgtccgtcctcccggtctatgatgta
gaagatgaaacataa
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