KEGG   Chondrus crispus (carragheen): CHC_T00004011001
Entry
CHC_T00004011001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CHC_T00004011001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ccp01002]
    CHC_T00004011001
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccp04131]
    CHC_T00004011001
   04121 Ubiquitin system [BR:ccp04121]
    CHC_T00004011001
Enzymes [BR:ccp01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     CHC_T00004011001
Peptidases and inhibitors [BR:ccp01002]
 Metallo peptidases
  Family M67
   CHC_T00004011001
Membrane trafficking [BR:ccp04131]
 Endosome - Lysosome transport
  Others
   Others
    CHC_T00004011001
Ubiquitin system [BR:ccp04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    CHC_T00004011001
SSDB
Motif
Pfam: USP8_dimer
Other DBs
NCBI-GeneID: 17323411
NCBI-ProteinID: XP_005715698
UniProt: R7QCT3
LinkDB
AA seq 338 aa
MGIEKLFNKCPVLPAEPTISIARYLRNIRQTVRQANEVEEKGETERAALLQIRILQLICK
TLPTHPEYELAENQSVVKEMRSIAHTGFANVERLANLLSDDRHVDQESEKEPVTRRRSRA
QRIEIATSLLDLFEKIAVEHTANGLRTIAVLGGRPEPRQNGGDGTSVSCICITALVIPSQ
MPSSDKSRIRYGADITDLLDKKGLTHMGFIEMCPDLGRVALTSSVMLARLQKKQPSAIGV
VIAPQDTTRVQAFSVNEGYGLDYLLACAERNITPAEEVIPRGQPGKGKPIWSKAQEVELR
NESEPAFKLYDLRPLAAARDEHDRKQQLSHQNDADDKL
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggcatcgaaaaacttttcaacaagtgccctgtgctccctgctgaacctactataagc
attgcaagatatctgcgaaacatacgccagacggttcgtcaggcaaacgaggtcgaagag
aagggtgaaacagagcgtgctgcgctgctgcagatccgtattttgcagctaatctgcaag
acgctacccactcatccagagtacgaactcgctgaaaaccaatccgtagtgaaggagatg
agaagcattgcacacacgggttttgcaaatgtggaacgattagcaaacctgttgtcggac
gacagacatgttgatcaggagtcagagaaagagcctgttactcgacgccgctccagagct
cagcgcatcgagattgcgacgagtcttttggatctctttgagaaaattgctgtggaacac
acggcgaatggtttgcgtactattgcggttctgggaggtcgacctgaaccacgacagaat
gggggcgacggcacatctgtaagttgtatatgtattaccgccttggttatcccttcacag
atgccgtcgtcggataagtccagaattcgatacggggcagatattacggatctacttgac
aagaagggcttgacacacatgggctttattgaaatgtgcccagacctaggccgtgtagct
ctcacctcttctgtgatgcttgcgcggttgcagaagaagcaacctagtgccattggagtt
gtgatcgctccacaagatactactagagtacaagccttttcagtgaacgagggctacggt
cttgactatttgctagcgtgtgcggaacggaacatcactcccgcagaagaagtgattcct
cgcgggcagccagggaaggggaaaccaatatggtcaaaggcacaagaagtagagcttaga
aacgagagcgagccagcatttaagctttatgatttacgacccctagctgcggcaagagat
gagcacgatcgaaagcaacaattgtctcatcaaaatgacgcagatgacaagttgtga

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