KEGG   Chondrus crispus (carragheen): CHC_T00004114001
Entry
CHC_T00004114001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
ccp  Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccp03400]
    CHC_T00004114001
DNA repair and recombination proteins [BR:ccp03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    CHC_T00004114001
SSDB
Motif
Pfam: SNF2-rel_dom zf-C3HC4_2 zf-C3HC4 Helicase_C zf-RING_5 zf-C3HC4_3 zf-RING_2 zf-RING_UBOX RING_XB3-XBAT31 zf-C3HC4_4 zf-rbx1 zf-ANAPC11 zf-RING_6 Sina_RING Prok-RING_4 zf-RING_4
Other DBs
NCBI-GeneID: 17323127
NCBI-ProteinID: XP_005715411
UniProt: R7QAQ4
LinkDB
AA seq 917 aa
MLDKENDKYSINQYFWEERSFSDSVDGCPNRYYYFPLAGELRLRKPPDVRGGMITEEMGL
GKTVEALALIAAQKKEHERVELDIFCEKKPTGVSITQGRVRAMKMNQRNEDKAQMVFCPL
NFGDEVLDYDPDVPYPKTLRVRRWPAKTTLVLCPTSLLEQWRTEAEERAPSLSLAEWGTG
ASSNTLRTTPDIAVGEFAKDIVLASYDALKRDSTLFKITWKRLILDEAQVTRRSSAQLAR
DTFNLRSESRFLMTGTPIVKGLEDLRGELAFLRVWPFTLFDDGFWERLIYCPFAAQESTA
FIDHLLNVTMMRHSKAQQLSLELPPRSYEIIEVKLEGSYRAVYCYILGCCLEELDDENGP
TDTCLLALRTLLRILLSACISPELLSLTALDLARRSTWSRRRGLSGSSVQSGGEVDLAKT
TAEEAIQFLAETGTRIVRDSKRSRALPTGQGLPYEQYLRMNVDDLVTLVEARGLLSEVGG
NFNQKRLAQLAAGGRHRIITDTLSQLRQTAIAAGLTTGVQSRALPRDSLISILTTHYDSV
ERRKAHGNIHEAGFAALTKLIEKKERPGCPVCMDSSVERLSLTKCGHFFCVTCISLMFRT
LGESRVQCPICRRKILPKDAIEVVSSDKDELSETVAGSDDGSGLDQDLESPFSVTKVMTT
ISEADIERYRDAPRPTAAEVWEEYGQIASPHNRYLGVGRDSDLPSLDAEFLRHMKAATAH
EAVSPKLDALHELIRTSEPGSKFCVVAETTDSLRGIGAWLEKQGIPVVGVGSRNWHMSQA
HSLGRASQEFAKDPNIRVFMLNTANAAGLTLTAANCVVFMGPMVRITDEMQAAARVHRIG
QQRPVRVVRIVARNTIEEQIMFRRGTIHGTGKEANALITPASELAVSDIVRLFRDVSTAD
EGRNLRRSARARARNQM
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgctggataaggagaatgataagtattctatcaaccaatacttttgggaagaaaggtca
ttctcagattctgtcgatggttgccccaatcgctactactactttcccctggccggtgag
ctccgcctccgaaagccccctgatgttcggggcggtatgataactgaggagatgggtctc
ggcaagactgtcgaagccttggccttgattgccgcccagaaaaaggaacatgagcgggta
gagcttgatatcttctgtgaaaagaaaccaaccggtgtttcgatcacccagggccgcgtt
cgtgctatgaaaatgaaccagcgaaacgaggacaaagcccagatggtgttctgccctctc
aattttggagatgaagtcctcgattatgatcctgacgtgccgtatccgaaaactctacgt
gttcgcagatggcccgcgaaaacgactcttgtcttgtgtcctacatctcttctggaacaa
tggcgaacagaagctgaggagagagcaccatctctttctcttgcagaatggggtacgggc
gcttcttcgaatactcttaggactactcctgatattgccgttggcgaattcgccaaagac
attgtcctagcatcctatgacgctctcaagagggactcgactctgttcaagataacctgg
aagcgcttgattctagacgaagcgcaagtgacacggcgttcctcggcacaattggctcgc
gatacttttaatcttcggtcggagtcgcgattcttgatgacagggacgccgattgtcaaa
ggtttagaagatctgcgaggggaacttgcgttcttgcgggtttggccgtttacactgttc
gatgatggcttctgggaacgtttgatatactgtccctttgcagctcaagaaagtacggca
tttattgaccatcttctaaacgtcacgatgatgcgacactctaaggctcaacagctatcg
cttgagctacccccgcgatcctatgaaatcattgaggtcaaacttgagggatcctaccgt
gcagtatactgctacatactaggatgttgccttgaggaacttgatgatgaaaacgggccg
acagatacatgcctgctggcgcttcgaacactattgcgaatattgctgtcagcttgcatt
tccccagaacttctcagtctaactgccctggacctcgcccgaagaagcacatggtcacga
agacgcgggctgtctggttcgtcagtgcagagtggtggcgaagtggaccttgccaagaca
acagcagaggaggccattcagtttttggcagaaacaggaacccgtattgtccgtgactcg
aaacgctctcgcgctctaccaacaggccaaggacttccgtatgagcaatatctacgaatg
aatgtggatgacttggtgacattggtggaagctagaggcctcctgtccgaagttggtgga
aattttaaccaaaagcgtctcgcacaactcgctgctggaggtagacatcgaattatcacc
gacactctatcgcagcttcgtcaaacagcaatagctgctggtttgacaacaggagttcag
tcgcgcgcgcttccccgagacagcttgatatcgattttgaccacacactacgattcagtg
gagcgacgaaaagctcatggcaatattcacgaagccgggttcgctgccctaactaaattg
atcgaaaagaaagagcggccgggttgtccagtgtgcatggattcatctgttgagcgactc
tcgttaactaagtgcgggcatttcttctgtgttacatgtatttcactcatgtttcgcact
ctcggggagagcagagtgcaatgccccatctgtcgccgcaaaattctgccgaaagatgca
attgaagtagtatcctcggacaaggatgaactttctgaaaccgtagcaggttctgatgat
ggtagtgggcttgaccaagatttggaatcgcctttttcagtcacaaaggtcatgacaact
atctcggaagcagatatcgaacgatatcgagatgcaccccgccccactgctgcggaagtg
tgggaggaatatggccaaatagcctcacctcataatcgctacttaggtgtcggtcgcgat
tcagatttgccctctcttgatgctgagtttttgcggcacatgaaagctgccactgctcat
gaggcggtttctccgaaactcgatgcccttcacgaattgattcggacctctgagcccggg
tcaaaattctgtgtagtggctgagactactgatagcttgagaggcattggggcttggtta
gagaaacaaggaattcctgttgtcggtgttggctctcgcaactggcatatgagccaagct
cactcccttggcagagcctcccaagaatttgcaaaggacccaaacatcagagtgttcatg
cttaatacggcaaacgctgctgggctaacattgactgcggcaaattgcgtagtctttatg
ggacccatggtgcggataacggatgagatgcaagcagctgcacgtgttcaccgaattggc
caacagcggccagtcagagtcgtgcgtatcgttgctcgcaacacaatcgaagagcaaatc
atgttcagacggggaacaatccacgggactgggaaagaagcaaatgccttgatcactccg
gcgagtgagcttgcagttagcgatatagtgagactcttccgggatgtctctacagcggac
gaaggacgtaatctccgcaggagtgccagggcacgagcccgcaatcagatgtaa

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