Chondrus crispus (carragheen): CHC_T00004174001
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Entry
CHC_T00004174001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHC_T00004174001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccp03021
]
CHC_T00004174001
Transcription machinery [BR:
ccp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CHC_T00004174001
RNA polymerase I system
RNA polymerase I
CHC_T00004174001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
17323245
NCBI-ProteinID:
XP_005715528
UniProt:
R7QCA5
LinkDB
All DBs
AA seq
374 aa
AA seq
DB search
MPATIGQLPSHLEKARSRVGVGFKKISNPVGTYGARTYQSLGYDNSLRLNDFKENCTLEI
LFCDDEEVLFDLVGTDAPIANALRRILLSEVPTLAIENVFVHRNTSIMHDEQLAHRLGLV
PLKIDPRPFEYWEKGLPVTVANTVKLSLRTKCEFNPSAPRDGEAPPSVLYKNSSVLSGSI
EHVPFGGHEQSKFIGNEVPRPVHEDILLCKLRPGQEIHVEMDATKNIGREHAKWSPVATA
GYRMLPEVNLKTRVVGATAKRLVNLCPAKVFDIEDDVAVVARPRDCTVCRECIREPEWEE
RVELTRKRDHFIFSVESTGAMPAPTLVTEALSVLTGKCDLVLAALDAALKQRTTHDNGVD
EENPDVEMDESEGS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaacgatagggcagttgccttcacatcttgagaaggcgcgttccagagttggc
gtcggattcaagaagattagcaacccagtcggaacatatggcgcgcggacatatcaaagc
ctaggctacgacaatagtttgcgcctaaacgactttaaggaaaattgcactcttgaaata
ctcttctgcgatgacgaagaggtgctgtttgatttggtcgggaccgatgctccaattgct
aatgctctgcgacgcatcctgctcagcgaagtaccaacgctcgccattgaaaacgtcttc
gtgcacaggaatacatccattatgcacgacgaacaactggcgcatcgccttggactcgtg
ccgctgaagatcgacccgcggccttttgagtattgggaaaagggtctaccggtgacagtg
gcgaatactgtgaagttaagcttgcggacaaagtgtgagtttaacccgtctgcgccgaga
gatggtgaggccccccctagcgtcttgtacaaaaattccagcgtgttaagcggttcaatt
gaacatgtcccgttcggaggtcatgaacaaagtaagttcatcggcaatgaagtaccaagg
cctgttcacgaggatattctgctatgtaaattacggcctggacaggaaatccatgttgaa
atggatgccacgaaaaacatcggcagggaacacgcgaagtggtcccctgttgcgacagct
ggttacaggatgcttccggaagtgaatttgaaaactcgcgttgttggtgcaactgcgaaa
agacttgtgaacctatgtccggcgaaggtgtttgatattgaagacgacgttgcggttgtg
gcacgaccacgggattgtactgtctgccgcgagtgcattagagaacccgaatgggaggaa
agagttgaactcacacgaaagcgtgaccattttatcttttctgtggaaagcactggggcc
atgcctgcacctactcttgttacagaagcactgtctgtacttaccggcaagtgtgatttg
gtgcttgcagcactggacgcagcccttaaacaacggacgactcacgataacggtgtcgat
gaggaaaatccggacgtagaaatggacgaaagtgagggatcctga
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