KEGG   Chondrus crispus (carragheen): CHC_T00004177001
Entry
CHC_T00004177001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CHC_T00004177001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccp03021]
    CHC_T00004177001
   03036 Chromosome and associated proteins [BR:ccp03036]
    CHC_T00004177001
Transcription machinery [BR:ccp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     CHC_T00004177001
   Coactivators
    SAGA/TFTC/STAGA complex
     CHC_T00004177001
Chromosome and associated proteins [BR:ccp03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     CHC_T00004177001
    STAGA complex
     CHC_T00004177001
    TFTC complex
     CHC_T00004177001
    SAGA complex
     CHC_T00004177001
    SLIK complex
     CHC_T00004177001
SSDB
Motif
Pfam: TAF6_C TAF Histone
Other DBs
NCBI-GeneID: 17323248
NCBI-ProteinID: XP_005715531
UniProt: R7QB25
LinkDB
AA seq 544 aa
MAVHGSLESGLGVSATMEPPNKRVAKRKRTPDKPEEDARLSPEAVHVIAQSVHNLPPLSD
PAAATLALDAEYRVRQIVQEGIKFMKHSKQNTLLPSHVSIALRVLNVEPVYGFGAKRRRG
NHGAGAFVGAVAGALGKPDAAGGGTQREGQFGQVDGVPELFFVHDSEVSVKSLLQAPPPE
LPLEVTVNAHWLAVDGKQPAISQNPMKQTQREELESGKRESDGTDGEGTQVEVRAPLKHD
LTRELQLYFQHVQDAIFGEDVGQLEACLNSISEDAGIAVLLPYLTKFVKDSVQRSIRDLR
VLFSVMRLVRAMLENEVFSELERYLHQLLPAVMSCVVGKRLCRNPRENHWALRDYTAGLL
REICGTAYAKGYVGVQQRIVKTFVDALKDVKRPLTTHYGAIVGITCLGKHTVEGVVVPLL
KGYLPKIIGLVEDVRQKSVRREEGSKVFGALAWAVSEDGVGNGVRPGQNGEASLNGMSDG
MQWKAAGAAGGKVSISRMSSVVPRAEEVHERLWREMDRRLYPFGESKSESELAVSLAEQK
KAAT
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggccgtgcacggatcgctagagtccggactcggcgtctctgccacgatggagccgcct
aacaagcgcgtcgcgaagcgcaagcgcaccccggacaagcccgaggaggacgcccgcctc
agccccgaggccgtgcatgtcattgcccagtccgtgcacaacttgcctccgctgtcggac
ccggccgccgccaccctggccctggacgccgagtaccgcgtgcgccagattgtgcaggag
ggcatcaaattcatgaagcactccaagcagaacaccttgctcccgtcccacgtcagtatt
gccctccgcgtgctaaacgtcgagcccgtatacggctttggtgcgaagcggcggcggggc
aatcatggcgcgggggcctttgtcggtgcggtagcgggtgcgttggggaagccagatgcg
gcgggtggggggacgcagcgggagggccagtttggtcaggtggacggcgttccggaactg
tttttcgtacacgattcggaagtcagcgtcaagtctctgctgcaggcgccgccgccggag
ctgccgctggaggtgacggtgaatgcgcactggctggcggtggacggcaagcagcctgcg
atttcgcaaaacccgatgaagcagacacagagggaggagttggagagcgggaagagagag
tcagacgggacggacggtgaggggacacaagtagaggtgagggcgccgttgaagcacgac
ttgacgcgggagctgcagctttactttcaacacgtgcaagacgcgatattcggggaggat
gtggggcagctggaggcgtgcttgaattcgatatcggaggacgcggggatcgcggtgctg
cttccatacctgacgaagtttgtgaaggacagcgtgcagcggtcgatacgagacttgcgg
gtattgttttcggtgatgcggctggtgcgggcgatgttggagaacgaggtgttcagcgag
ctggagcggtacctgcaccagctgcttccggctgtgatgtcatgcgtggtggggaagcgg
ctgtgtcggaatccgcgcgagaatcactgggcgctgagagactacacggcggggctgcta
cgagaaatctgtgggactgcgtacgcgaaagggtacgtgggggtgcagcagcggatcgtg
aagacgtttgtggatgcactgaaggacgtgaaacggccgctgacgacgcactatggggcg
attgtggggatcacttgtttagggaagcacacggtggagggggtggttgtgccgctgctg
aaggggtatttgccaaagatcattgggcttgtggaggatgtacgacagaagagtgtacgt
cgtgaggaagggtccaaggtatttggggcgctggcgtgggcggtgtcagaggatggggtt
gggaatggggtgcgaccgggacaaaatggggaagccagcttgaatggaatgagtgatggg
atgcaatggaaggcggccggggcagcgggaggaaaagtgtcgatatctcgcatgtcaagt
gtggtaccccgtgccgaggaagtgcatgagagactgtggagggagatggacaggcgactc
tatccgttcggggaatccaagtccgagtcggaactggccgtgtctctagctgaacaaaag
aaggccgctacatag

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