Chondrus crispus (carragheen): CHC_T00004177001
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Entry
CHC_T00004177001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHC_T00004177001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccp03021
]
CHC_T00004177001
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00004177001
Transcription machinery [BR:
ccp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CHC_T00004177001
Coactivators
SAGA/TFTC/STAGA complex
CHC_T00004177001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
CHC_T00004177001
STAGA complex
CHC_T00004177001
TFTC complex
CHC_T00004177001
SAGA complex
CHC_T00004177001
SLIK complex
CHC_T00004177001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
Motif
Other DBs
NCBI-GeneID:
17323248
NCBI-ProteinID:
XP_005715531
UniProt:
R7QB25
LinkDB
All DBs
AA seq
544 aa
AA seq
DB search
MAVHGSLESGLGVSATMEPPNKRVAKRKRTPDKPEEDARLSPEAVHVIAQSVHNLPPLSD
PAAATLALDAEYRVRQIVQEGIKFMKHSKQNTLLPSHVSIALRVLNVEPVYGFGAKRRRG
NHGAGAFVGAVAGALGKPDAAGGGTQREGQFGQVDGVPELFFVHDSEVSVKSLLQAPPPE
LPLEVTVNAHWLAVDGKQPAISQNPMKQTQREELESGKRESDGTDGEGTQVEVRAPLKHD
LTRELQLYFQHVQDAIFGEDVGQLEACLNSISEDAGIAVLLPYLTKFVKDSVQRSIRDLR
VLFSVMRLVRAMLENEVFSELERYLHQLLPAVMSCVVGKRLCRNPRENHWALRDYTAGLL
REICGTAYAKGYVGVQQRIVKTFVDALKDVKRPLTTHYGAIVGITCLGKHTVEGVVVPLL
KGYLPKIIGLVEDVRQKSVRREEGSKVFGALAWAVSEDGVGNGVRPGQNGEASLNGMSDG
MQWKAAGAAGGKVSISRMSSVVPRAEEVHERLWREMDRRLYPFGESKSESELAVSLAEQK
KAAT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcacggatcgctagagtccggactcggcgtctctgccacgatggagccgcct
aacaagcgcgtcgcgaagcgcaagcgcaccccggacaagcccgaggaggacgcccgcctc
agccccgaggccgtgcatgtcattgcccagtccgtgcacaacttgcctccgctgtcggac
ccggccgccgccaccctggccctggacgccgagtaccgcgtgcgccagattgtgcaggag
ggcatcaaattcatgaagcactccaagcagaacaccttgctcccgtcccacgtcagtatt
gccctccgcgtgctaaacgtcgagcccgtatacggctttggtgcgaagcggcggcggggc
aatcatggcgcgggggcctttgtcggtgcggtagcgggtgcgttggggaagccagatgcg
gcgggtggggggacgcagcgggagggccagtttggtcaggtggacggcgttccggaactg
tttttcgtacacgattcggaagtcagcgtcaagtctctgctgcaggcgccgccgccggag
ctgccgctggaggtgacggtgaatgcgcactggctggcggtggacggcaagcagcctgcg
atttcgcaaaacccgatgaagcagacacagagggaggagttggagagcgggaagagagag
tcagacgggacggacggtgaggggacacaagtagaggtgagggcgccgttgaagcacgac
ttgacgcgggagctgcagctttactttcaacacgtgcaagacgcgatattcggggaggat
gtggggcagctggaggcgtgcttgaattcgatatcggaggacgcggggatcgcggtgctg
cttccatacctgacgaagtttgtgaaggacagcgtgcagcggtcgatacgagacttgcgg
gtattgttttcggtgatgcggctggtgcgggcgatgttggagaacgaggtgttcagcgag
ctggagcggtacctgcaccagctgcttccggctgtgatgtcatgcgtggtggggaagcgg
ctgtgtcggaatccgcgcgagaatcactgggcgctgagagactacacggcggggctgcta
cgagaaatctgtgggactgcgtacgcgaaagggtacgtgggggtgcagcagcggatcgtg
aagacgtttgtggatgcactgaaggacgtgaaacggccgctgacgacgcactatggggcg
attgtggggatcacttgtttagggaagcacacggtggagggggtggttgtgccgctgctg
aaggggtatttgccaaagatcattgggcttgtggaggatgtacgacagaagagtgtacgt
cgtgaggaagggtccaaggtatttggggcgctggcgtgggcggtgtcagaggatggggtt
gggaatggggtgcgaccgggacaaaatggggaagccagcttgaatggaatgagtgatggg
atgcaatggaaggcggccggggcagcgggaggaaaagtgtcgatatctcgcatgtcaagt
gtggtaccccgtgccgaggaagtgcatgagagactgtggagggagatggacaggcgactc
tatccgttcggggaatccaagtccgagtcggaactggccgtgtctctagctgaacaaaag
aaggccgctacatag
DBGET
integrated database retrieval system