KEGG   Chondrus crispus (carragheen): CHC_T00004187001
Entry
CHC_T00004187001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K03124  transcription initiation factor TFIIB
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CHC_T00004187001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccp03021]
    CHC_T00004187001
Transcription machinery [BR:ccp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     CHC_T00004187001
 Prokaryotic type
  Archaeal type
    TFB
     CHC_T00004187001
SSDB
Motif
Pfam: TFIIB
Other DBs
NCBI-GeneID: 17323258
NCBI-ProteinID: XP_005715543
UniProt: R7QCC1
LinkDB
AA seq 611 aa
MLSPLREPVYAASARTLSGSLAEMERIIGETLFSGYVGYNGRAPGSTTKKEELQESAERN
RTGGDARHTLVAYFEIVELASILCVDRETTNLAIRTFRHTANNTSLRNRNVESLATAAFV
SAAERRWNEYQDWSKREKGAVPSDKEPHLPARDEDAPAASSSEWPTVPRHLSVEEISTAA
NLDVAEVVRYLKVVNIALRKQRPENSSSIAAHMPTFCSRLDLPERTRRLAIGIAEKAMEN
NICSRRYPPSLSAAAIRLACQLDGVRKTQVEICRATPVTDVTLRKVHKELIRDESMVIPE
WYTNDKRQQTEATFSETGRPFARPAAKRATERASSSQEDREESPSDEKTGPAADSSDLGS
QQEEPNVSLVPPPLPPGFGKGQGRPKAKREEEKKAEPVVSQPQPPMPNSNPMLAMLNNPA
MQAFANVFAMMPQLSPPPPPALPPLPSASDSKGPQVQARGPGDSSERADAREVTPPPENG
VGKKNEESRSLAATKPEQSQPVQSSQPLQANGNLMGGVQSMMKMVQAMQAIQAMQKQTVE
QEGGEATEQLNPIAMMAMAMAQAQNAVAMASKSTVAQAQPNAPQDSSQAKPALDEPGPEA
QGTKEQNQLEN
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgttgtccccactgcgcgaacccgtttacgctgcatctgctcgcacgcttagcggttcg
cttgcggaaatggagagaataatcggcgaaacactcttttccggttacgtgggatacaac
ggcagggcgccaggtagcacgacaaagaaagaggagctgcaagagtctgcagaacggaac
agaacggggggcgacgcgaggcacaccctggttgcttacttcgagattgtcgaactcgca
agcattctttgcgtggacagagagaccacaaacttggcgattcgcacgttccgtcatacc
gccaacaacacgagtcttcgcaatagaaatgttgaatcattagcaaccgctgcgtttgta
tctgcagcggagagaaggtggaatgagtaccaggattggtcgaaacgggagaaaggggcc
gttccaagtgacaaggaacctcaccttcctgcgcgtgatgaagacgctcccgcagcatcg
tcttcagaatggcctactgtgccaaggcatctctcagtcgaagagatttccacggcggcc
aatctggatgtggccgaggtcgtgcgatacctgaaagtagtcaacattgccctccgtaag
cagcgtcctgagaatagttcttcaatcgctgcgcacatgccaacgttctgcagtcggtta
gatctcccggagaggactcggagacttgccattgggattgcggagaaagccatggagaac
aacatttgctcgcgacgttatccaccctcgctctctgcagcggccatccgtttggcatgt
cagctggacggcgtccggaaaacgcaagtggaaatatgccgtgcaactccagtcacagac
gttactcttcgcaaagtgcacaaggagcttatccgtgacgaaagcatggtgataccggaa
tggtacacgaatgacaagcgtcagcagacggaggctacgttttctgagactgggcgccct
tttgcgagacctgctgcaaagcgtgccactgaacgggcctcttcctcgcaggaagacaga
gaagagagtccaagtgatgagaagactgggcctgcggcagatagcagcgacttgggttct
caacaggaggagccaaacgtctcacttgttccgccgccccttccccctggattcggcaag
ggacaaggacgtccgaaagcgaagagagaagaagagaagaaagcagaaccagttgtatcg
cagccgcagccgcctatgcccaacagtaaccctatgcttgcaatgctcaacaatcctgct
atgcaggcatttgcaaatgtatttgcgatgatgccgcagctcagtcctcctccacctcct
gcgctacccccacttccgtcggcgtcagattcgaagggccctcaggtgcaggccagggga
cctggagattcaagtgaaagagctgatgcgagggaagtcaccccaccacctgagaatggt
gtaggaaagaagaacgaggagtctcgttcattggctgcaacaaagcctgagcagtcgcaa
cctgtgcaatcatctcaacctctacaggcgaatggaaatttgatgggtggtgtgcaatca
atgatgaaaatggttcaagccatgcaagcaatccaggcgatgcagaaacagactgttgag
caagagggaggggaagctaccgaacaactcaacccaattgcaatgatggcgatggcaatg
gcacaagctcaaaatgccgtggcgatggcgtccaaatccacggtggctcaagcgcaaccg
aatgcaccacaagattcctctcaagcaaagccagcgttggatgaacctggtccggaggca
cagggaacgaaggaacaaaatcagctggagaactga

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