Chondrus crispus (carragheen): CHC_T00004271001
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Entry
CHC_T00004271001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K21866
ion channel POLLUX/CASTOR
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccp02000
]
CHC_T00004271001
Transporters [BR:
ccp02000
]
Other transporters
Pores ion channels [TC:
1
]
CHC_T00004271001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Castor_Poll_mid
Slo-like_RCK
DUF2976
TrkA_C
Motif
Other DBs
NCBI-GeneID:
17323354
NCBI-ProteinID:
XP_005715638
UniProt:
R7QCL5
LinkDB
All DBs
AA seq
664 aa
AA seq
DB search
MALTWCLILSSGTLISWMASEPWIESLWAAALGSGLDWGFINSTSPSLRLVAVCTNVGGL
VLTALLLSIISDAVQTKYDSLRKGESSVTETGHTLIIGWSVKSLSVMVQLAKAGESAGGN
VIVCLSDQREKEDMENDIAQCDFSFANVGTRVVCRSGSPLSYQDLQKVSFFRARSIIILG
DDENDAETNDARSLQILLSIIVVPRPDRVVIEVMDTENAAIMTSICPELVEPVLANDVLG
RLMLQAARNPLVADVWQELLGFDGCETYSGQWGILRGLSFKEVLLCFEDAIPLGVKTASG
DLMLNPSDSYVIGDGDQIIVLAEDDDTYCASITHSLIREAVYDPYNHAMRYIERILFCGW
RFDMGNLLQVYSAVAPFGSEFWILSELAVEQRESELSLRGWESNSRVKVVHRVGACRRNV
LAQLPLETFSSVIVGASDAHSNHLRSSDARVITVVMMIQDITTRRNEPSPDNEARSQRFI
GSKATLDNNSSRGVIVGEIVDSRSRAMLSIVNSIDAVVASSELISKAVAMVSEDGSVNRF
LNTLFDPHDSEITLESVESYVDLTKDEEVSFFELMARGRNVGTIVLGYLEREIVALNPGE
KDLRRGWHPDDLLIVLTQAPSGSSLAPSDFLSDIADIRTMDMTGELGWAEPISMGKRCKV
RFRG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggctttaacatggtgcctcattctgtcttcaggtacactaatcagttggatggcttct
gagccgtggatagagtctttatgggcagccgcactcgggtcgggtctcgattggggattc
atcaactcaaccagcccctccttacgattggtcgccgtctgcacaaatgttggaggattg
gttctaactgctctactcctatccattatttctgatgctgttcagacaaagtacgacagt
ctacgaaaaggagaaagctctgtgacggaaactggccataccctcataatagggtggtct
gtgaagtcgctttctgtcatggttcaattggcgaaagctggagaaagcgccggaggtaac
gtcattgtatgtctttccgatcagcgagaaaaagaagatatggaaaacgatattgcacaa
tgtgatttcagttttgcaaacgtgggtactagagttgtttgtagatctggatcccccctt
tcatatcaagacttgcaaaaggtgtccttcttccgagcccggtcaataattatcttgggt
gatgatgaaaatgatgctgagacaaacgatgcccgttcattacaaatccttttaagcatt
attgtcgtcccccggccagacagagtcgtcatcgaagtaatggatacagaaaatgctgca
ataatgacctcaatatgcccagagcttgtcgagcctgttctagctaatgatgtgcttgga
aggttgatgctgcaagcagcaagaaatcccctggtagcggacgtttggcaagaactgctg
gggttcgacggctgcgaaacgtactcaggccagtgggggatactacggggactgagcttt
aaggaggtccttctatgcttcgaagatgcaatcccgcttggagtgaagaccgcatctgga
gatttaatgctgaacccttcggattcgtacgtcattggtgatggcgaccaaattattgtt
cttgcagaagacgacgacacctattgtgcttctattacacattctctcattagggaagcg
gtgtacgacccctacaatcatgccatgaggtatattgaacggattttgttctgtggttgg
cgctttgacatgggaaacttactgcaggtttactctgccgttgctccattcggatcagaa
ttttggatactatctgaacttgctgtagaacagcgagaaagtgagttgtcactcagaggg
tgggagtcgaatagtcgagtcaaggttgtgcaccgtgttggtgcatgtcgacgaaatgtg
ctagcccaattacctttggaaactttttcaagtgttattgttggcgcatccgatgcgcat
tcaaaccatttgaggtcttctgacgcacgtgtgataacagtagtgatgatgatacaggat
atcaccacgagaagaaacgaaccatctccggacaacgaagcacggagccagcgtttcatt
ggctcaaaggccactcttgataataactcttctcgaggagttatagttggggaaatcgtg
gattctcgatcacgggctatgctttcgattgtcaattccattgacgcggtcgttgctagc
agcgagcttatttcgaaggcagtggcaatggtttcagaagatggttcagtcaatcgtttt
ctaaacacattatttgacccacatgactccgaaatcaccctggaaagcgttgaatcttat
gtggacttaacaaaagatgaggaagtcagtttctttgaactgatggctcgcgggaggaac
gtcggcacaattgtgttaggctacctggaaagggaaattgttgcgttgaacccaggcgag
aaagatcttcgaagaggatggcacccagatgatcttcttattgttctgacccaagccccc
tctggttcttcgttggcaccatccgatttcttgagtgatattgcagacattaggactatg
gacatgaccggagaactgggctgggcagaacctatcagcatgggaaagcgatgcaaggtc
cggtttcgaggttaa
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