Chondrus crispus (carragheen): CHC_T00004281001
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Entry
CHC_T00004281001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHC_T00004281001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccp03400
]
CHC_T00004281001
Enzymes [BR:
ccp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
CHC_T00004281001
DNA repair and recombination proteins [BR:
ccp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHC_T00004281001
Prokaryotic type
CHC_T00004281001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Cas_Csm6_6H
Motif
Other DBs
NCBI-GeneID:
17323363
NCBI-ProteinID:
XP_005715650
UniProt:
R7QEF0
LinkDB
All DBs
AA seq
529 aa
AA seq
DB search
MELPVVRRSLRLRRPQSKRPRTSSVVEPVSPRRSDEATSDSDFAPSSPGSSLAGDEEDEL
FSLQHERKRPVRIRKAIDPVSSHSAPTPRSPGRCSLAPPEVLTLRTALLDWYADHFRTLP
WRSSPIYQKGGLLPLTHSVPHSPSSPGAPYAVWVSEVMSQQTRLSVVEGYFTRWMAAFPD
IQALADAPREKVNQLWAGLGYYRRARFLHEGAAQILSEYNGRLPEDVPTLLKIKGIGRYT
AGAISSIAFGKNVPLVDGNVERVLARLCPGLTSPREDGEQRPPLPAAYWDLAEILVRDVQ
CPGDFNQALMEFGATLCKPKAVLCEACPVQDMCGAYQEAVELGVENPAEYVTKYPIKDPK
KATKVRNETVFVLVACVRTTSGYKYLVLQRPGDGLLAGLWEAPNVVLQSKTEAGKAKTYK
TLQSLLSETIGHADEARRETAYTKMGEILQVDVGKVTHVFSHIRQTLNVRLTVLQHPDGD
GTLKDGKTSTGVPFRWISEEELKTGAVPTQMKKVFAAAEKKLPRAHKLR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagctaccggttgttcgacgatcattacgcttacgtagaccgcaaagcaagcgtccc
cgtacatcatcagtcgttgaaccggtctcccctcgacgttctgatgaagcgacctcagat
tccgacttcgccccatcctcgcctggttcttcactagcgggtgatgaagaggacgaatta
ttttctttgcaacatgagcgaaaacgccccgttcggatccggaaagctatcgaccctgtt
tcgagccacagtgctccaacgcctcgcagcccaggtcgttgttcactagcaccacctgaa
gtgttgacgttaagaactgcactattggactggtacgctgatcactttcgtacgctacct
tggcgatcgtctcccatctatcagaaagggggtcttctaccattaactcactccgttcca
cacagtccttcgtcgccgggagcgccgtatgccgtgtgggtgtccgaagtcatgtctcag
cagactcgtctatcagtcgtggagggctacttcacgcgatggatggccgcgtttccagac
atccaggcccttgccgacgctccacgggagaaggtcaaccagctttgggcgggattgggc
tactatcgtcgagcgcgctttttacacgagggagcggctcaaattcttagtgagtacaat
gggaggttgcctgaagacgtccctacccttctgaagatcaagggaattggaagatatact
gcaggagctattagctccatcgcgtttggaaagaacgtcccgcttgttgatggcaatgtc
gaacgcgttcttgcgaggctctgcccagggcttacctcccctcgcgaggatggggagcaa
cgacccccactaccagccgcatactgggacctggcggagatactcgtcagggatgtccaa
tgtcctggtgatttcaaccaagcgctcatggaatttggggctactctatgcaaaccgaag
gccgtgttatgtgaggcttgtcccgtccaagacatgtgcggtgcctatcaggaagcggtc
gagctgggtgtggaaaacccagctgaatatgtcacaaaataccccatcaaggacccgaag
aaagcgacaaaagtgagaaacgaaactgtatttgtcctcgtcgcctgcgttcggaccaca
agtggctataaatacctcgtccttcaaaggcctggcgatggtctactagcggggttgtgg
gaagcaccgaacgttgtcttgcaatcgaagacagaagcgggaaaggccaagacttacaag
acccttcaaagcctccttagcgaaaccattggtcatgctgatgaggcaagacgagagacg
gcatatacgaaaatgggagaaatcttgcaagtcgatgttggcaaggtcactcacgttttc
tctcatattcggcaaacgctgaacgttcgtctgacagttttgcagcatcccgatggcgat
ggcacgttgaaggacggcaagacgtcaacaggtgtcccttttcgatggatttctgaggag
gagctcaagacgggtgccgttcccactcaaatgaaaaaggtttttgcagctgctgaaaaa
aagcttccacgcgctcacaagcttcggtaa
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