Chondrus crispus (carragheen): CHC_T00004316001
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Entry
CHC_T00004316001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-GeneID:
17323470
NCBI-ProteinID:
XP_005715754
UniProt:
R7QET6
LinkDB
All DBs
AA seq
1133 aa
AA seq
DB search
MGESSSSFIPMLPRWRLPLMAPSQARQIRHRMCTSSSDGARSLSRLREMQRSILQRRSKL
QDKHPPGPPKDEAKELAEALFPNASMQAANKAGVEADSAYQDDVKRETLGPLGIEEENKR
DVLPEKTSTVHDENCTELLSSNPAEELAEDFGPVIHEWGRGEPTGMREVQGSWRVTASTR
KRPSESVGLGNALSTQARDDDEPSSSALGPITTIRRSSFTPKENSHGDTLQGNVSKRPRS
RPDVLVRPEVGGDATSSTNAELSPMDASINMLSHISLTRGNGRLPWKSDNLRDTAQLSIE
TEVVRLPFLSLYTNGPSFQRKEWKLPRPGFRQIKFANSSATENLNNSDCSPILESLNEYQ
RHAVISDPNQACLVLAGPGSGKTRVLTHRVAYLVKKHNVSPYRILAVTFTNKAAEEMKKR
VAELLGIKFSPAWAQDGGPRLALGTFHSISARILRKHGSETGITSDFVICDTSDTRQLIS
RLLKNEQGSTPDYSSISEAVAAISKLKNDRDGQLEKFWPRRVWRRINELRNLYDKELRAM
NHLDFDDLLLETRKLLQTSERVRGTLQETYEHVLVDEWQDTNHVQFDIVSLLSAKHENLF
VVGDADQSIYKFRGADSGNLERFMEEFPNAAKIALEENYRSSGCIVAAAQAVIEGNTDRP
SKKMTTVNDFGAKVILRETLDDRQESQYVVSTVKSLLRENSLRSYSDVAILYRTNAQSRL
IEEAFIQNDIPYRLLSGTKFYDRQEIRDLVAYLRVLSNPADDTAFRRIVNTPPRGIGKKT
QEEFEQFCLERQVPLVLGLSELLKLYTNGDVSDGAIGMGRAATQKLAGFADMLSKLQKRS
ESFLSDEEPSPGSDCVDTLLTAIIEEVGYRDYVEKREGNGSAASEKVLERLGNIEELVRA
SSRFSSLHRYLEGVTLMVDTMHKGAGNADNGSSDRASASLMTLHGGKGLEFGAVFIIGAE
DSVIPISRGAKGDIEEERRLLYVGMTRAKEHLQITWRAKKLVLQGGKAFSRESSGPSRFL
DDIPAELVTRIVTPSSSNRRSNHTHSPARRRGKHKTGRLSSQLASLSLEVEGPVTQWRAG
DSVRCGEHGRGTVTIGGPATEGGAWIEVMFADGSRHFVNTIAQNVELLYTPSS
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagtcatcttcctcattcatccctatgttgcctcgatggcgcctgcctctcatg
gcgccctctcaggcccgtcaaatacggcatcgtatgtgcacatcctcatctgacggggca
agatctctgagtcgcctgcgggaaatgcagcgttctatcctgcagaggcgctcgaaactt
caggacaagcatccaccggggccacctaaagacgaggccaaggagctcgccgaagccctt
tttccgaacgcaagtatgcaagctgcaaacaaagctggcgtcgaagcagactcggcatat
caggatgacgttaaaagagaaactttgggtccccttggaattgaagaagagaacaaacga
gacgtactaccagagaagacctcaactgtacacgatgagaattgcacggagctgctgagt
agcaatcctgcagaagaacttgcggaagatttcggtcccgtaatacatgaatggggaagg
ggcgagcccacaggtatgcgggaagtacagggaagttggcgggtcacagcatctacgcga
aaaaggccgtctgaatcagtaggcctcggcaacgcactttccacccaggctagagacgac
gacgaaccttcatcttcagccctagggccgattactacgatcaggaggagtagtttcacg
ccaaaggaaaacagtcatggtgatactttgcaaggaaacgtgtcaaagaggcccagaagc
cgtccggatgtgcttgtgagacctgaagtgggtggcgatgctacttctagcacgaatgca
gagctatcccctatggatgccagcattaatatgttgagccacatttccttgacgagaggg
aatgggcgcctgccgtggaaatccgacaatttacgtgacacggcacagctatcaattgaa
acagaagttgtccggctcccattcctatccttgtacacgaatggaccttcctttcaacga
aaggaatggaaactaccgcgaccaggtttcaggcaaatcaaatttgcaaacagttcagca
accgaaaacctgaacaatagtgactgcagtcctatattagaaagtctcaacgaataccaa
cgacatgctgtcatatcagatccgaatcaggcgtgccttgttctcgccggaccaggttcc
ggtaagacgagagttttgacgcacagagttgcgtatctggtgaaaaagcacaatgtttca
ccatatcgaattttggcagtaacatttacgaataaggccgcggaagagatgaagaaacgg
gttgcggagctgttgggaatcaaattttctccagcatgggcacaggacggcggtcctcgc
cttgcattgggcacttttcactctatttccgctcgcatccttcgaaaacacggctctgaa
acgggaattacttctgactttgtgatttgcgacacatcagacactcggcaactcatttcg
cgattactaaagaacgagcaaggttctacccctgattattcaagtatcagcgaggctgta
gcagcaatctcaaagctcaagaacgaccgagatggtcaactagaaaagttttggccacgc
cgagtgtggagacgcattaatgagttacgaaatctttacgacaaagagctaagggccatg
aatcacctcgattttgacgaccttctgttggagaccaggaaacttcttcaaacgtcggaa
agagttcgtgggactcttcaagagacgtacgaacatgttcttgttgatgagtggcaagac
acgaaccatgtccagttcgacatcgtatctcttctgtctgcgaaacatgagaatcttttc
gtcgttggggatgcggaccagtctatatacaagtttcgaggggctgatagcggaaatttg
gagcgcttcatggaagagtttcccaacgcagcaaagatcgcgttagaggaaaactatagg
tcatccggatgtattgtcgcagccgcccaagctgtgatcgagggcaacactgaccgaccg
tcgaaaaaaatgacgactgtcaacgactttggggccaaagttattctccgtgaaacacta
gatgacagacaagaatcgcaatatgttgtatcaacagtgaagagtctcctgcgggaaaat
tctctgaggtcgtattccgatgtggctattttgtatcgtacaaacgcacagtctaggtta
atagaagaagctttcatccaaaatgatatcccataccgactcctgtcaggtacaaagttc
tatgatcgacaagaaataagagacttagtcgcttatcttcgtgtattgtcgaatccagcc
gacgatacagccttcagacgaattgtgaacacccctccgcgggggatcggcaagaagacg
caggaagaattcgaacagttttgcttggagaggcaagtgcctctcgttctggggctcagt
gagttacttaagctatacacaaatggggacgtgagcgatggcgcaatcggaatgggaagg
gctgctacgcagaagcttgcaggtttcgcggacatgctgagcaaactgcaaaaaaggtct
gaatcatttctttccgacgaggaacccagtccagggagtgattgcgtcgacacgttgctc
acggccatcatcgaggaggttggctaccgtgattacgttgagaaacgagagggaaatggc
tctgcggcatctgaaaaggtgttagagaggcttgggaacattgaagagcttgttcgtgcg
tcctcgcggtttagtagcctgcatcgatatcttgaaggagtgactctcatggttgatacc
atgcacaaaggagcagggaacgccgataatggttcctctgacagagcttctgcttcactg
atgacgttgcacggcggtaagggcctagaatttggagctgttttcattattggcgcagag
gacagtgtgattcctatctcgcgaggagcaaagggggacattgaagaagaacgcagatta
ctatacgtgggaatgacaagagcgaaggaacaccttcaaatcacatggagggctaaaaaa
ctagttttgcaaggtggaaaggccttctcccgtgaaagttcggggccatctcgattcctt
gacgacattccagctgaactagtaactcgtattgtgacgccatcgtccagtaacagacgt
tcaaatcacacacacagcccggcccggcgtcgcgggaaacacaaaacgggccgcttgtcg
tctcagctggcttctttgtctctcgaagtggaaggccctgtcactcaatggcgagcaggg
gattcagtacgctgcggcgagcatggaaggggcacagtaaccattggaggacctgcaact
gagggaggtgcatggattgaggtcatgttcgctgacggatcacggcactttgtcaacaca
attgcccaaaatgtggagttgttatacacaccatcgtcatga
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