Chondrus crispus (carragheen): CHC_T00004317001
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Entry
CHC_T00004317001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00004317001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
CHC_T00004317001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
17323471
NCBI-ProteinID:
XP_005715755
UniProt:
R7QEQ3
LinkDB
All DBs
AA seq
767 aa
AA seq
DB search
MEVPRRFDISEKAPENEGRGDSKPLQTYRESKPADCAKNAAEAHALDRLAVKPESKPLPL
ESVHEAAQEERHESSFRCSELTSMTTPRLRSDKPERSFETETLVKAGKLDSARKSEEPVQ
KRDQFERTSVTKQDCAAKRIPEKQGQGDLKEVESLRLESKSEKLQSEIKSQKAVEDKDRL
ANNSDKQSNCPPQQLLREEERVDSKPLEVAGKAKQNLEGFKAVSSHPSERQGDVPEQACM
KDEQMNTKDSQSPKKSPENIHNGKTLKSPSDKSIPSSESQSSSSEGSESGSSTLESDSSS
PSSAEVVIATTALMMKDDEGPMDKAALRTKNEQNVNDIEIKKPTIQVTAAHKLLALGKVS
GVMDKTVIIMSTEAEKAKSSGMPCVESERDIAEASALDSGSIVCFGDRTVLGEIFETFGQ
VRSPYYIIRFNNEEEISEVNAKVGRDVFYVPELSKTVRAKDVHIKGYDSSNFFDEEVGNK
EFSDDEAEAEARRSRKRARQGGLPTSLSAKSIQRGAVTPKRFMPRQRLQNEKQGWRTRSQ
SAYVPGRGGDGFNPNLGPTAPHMSMSATGAAASNGAFHRGQPNHGSWGGQRGNEFENRMV
NAVHPPNAMRHGNARVAPNNAYSNSMYTPSALMHQPGAPWVNGGQTYQGSPNSAMVPHGP
YPGGRVPFPAPNGFLPYNQPPTQFQGTPIPPSTYSPQWAGMGNAHPSSSIQGQPLQYPTG
PNSQMYPSAPIIYPPGAYNYPQSSFVPETPPPNFPAPANDFPRPPHK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaccacgtcgttttgatatttcagagaaagcgcctgagaatgaaggacgagga
gattccaagcccctccaaacttatcgggaatcaaagcctgctgattgcgccaagaatgca
gcggaagcccacgccttggaccgacttgcagttaaacccgagagcaaaccgctccctcta
gagagcgtgcatgaagcggcacaagaagaacgtcacgaatcgtcattcaggtgttctgag
ttgacttcaatgacaactccacgtttgcgaagcgataagcccgagagatcttttgagaca
gaaacgctagtaaaggccggcaaattggactctgctcggaagtctgaggagcctgtccaa
aaacgtgatcagtttgaacgtacctccgtcacaaaacaagactgcgctgcgaagcgaata
cccgaaaagcaaggtcagggagatttgaaggaagttgaatctctacgtttagagtccaag
tccgagaaattacagtccgagataaagtcacagaaagctgtcgaggataaggatcgactg
gcaaataactcggacaagcaatccaattgccctccgcaacaattgctcagggaagaagag
cgagtggactcaaagcccttggaagttgcgggcaaagcaaagcaaaatcttgagggtttc
aaagctgtctcaagccatccaagtgaacgacaaggagatgtgcctgagcaagcttgcatg
aaagatgaacaaatgaacacgaaggactcgcaatcccccaagaagtcacctgaaaacatt
cacaatgggaagaccctcaagagcccctccgacaaatcaattccatcctctgaatcgcaa
tcgagcagcagcgaaggttcagagagtggctcatcaactcttgagagtgattcatctagt
ccttcatcagctgaggtcgtcattgcgaccacggctttgatgatgaaggatgacgaagga
ccaatggacaaggccgcactgcgaacaaaaaatgagcaaaatgtgaatgacattgagata
aaaaaacctacaatacaagtgactgcagcgcacaagcttctagcgctcgggaaggtctca
ggggtaatggataagacggtcatcatcatgagcacagaagctgagaaggcgaagtcctcc
ggtatgccttgtgttgaaagcgaacgggatatcgcagaggcatctgcgcttgactctggt
tcgattgtgtgcttcggcgatagaactgtcctcggtgagatattcgagaccttcggccaa
gtgaggtctccgtattacattattcgtttcaacaacgaagaagaaatttccgaagtgaac
gctaaagtgggacgggatgtgttctacgtgccggagctttcaaaaactgttcgtgcaaag
gatgtccacataaaagggtacgactcgagcaacttttttgacgaggaagtcggaaataag
gagttttctgatgacgaggccgaggccgaggcccgccgtagtcgcaagcgtgcgaggcaa
ggggggttgcccacatctctatcagcgaaatctatacaacggggcgcagtgacaccgaag
aggtttatgccgaggcagcgtcttcagaatgaaaaacaaggttggaggacgaggtcgcaa
tctgcgtatgtacctggccgtggaggggacggctttaacccaaatctaggaccgacagct
cctcacatgagtatgagcgcgaccggagctgcagctagtaacggagccttccatcgagga
caaccgaaccatggaagctggggagggcaacgtggcaatgagttcgagaatagaatggtg
aatgcggtccatcccccaaatgcaatgagacatgggaatgcgagagtcgcacctaacaat
gcttattccaacagcatgtacacgccctcagccctaatgcaccaaccgggagccccatgg
gtcaatggggggcaaacgtatcaaggatcccctaattcagcgatggtgccgcatggtcca
tatcctggagggagagtaccattccccgccccgaatggttttctaccctacaaccagcct
cctacgcagttccaaggtaccccaatccctccatcgacatactccccgcaatgggctggg
atgggaaacgcgcatccatcgtcaagtattcagggccaaccgctccaatatccaacaggg
ccaaactcccagatgtatccctctgctccaataatttatcccccaggtgcatacaactac
ccgcagtcatcctttgtcccggagacgcctccacccaacttcccagcacctgcaaatgac
tttccgagacctccacacaagtag
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