Chondrus crispus (carragheen): CHC_T00004321001
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Entry
CHC_T00004321001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K12819
pre-mRNA-processing factor SLU7
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHC_T00004321001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccp03041
]
CHC_T00004321001
Spliceosome [BR:
ccp03041
]
Complex C
Other components
Step II factors
CHC_T00004321001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
17323492
NCBI-ProteinID:
XP_005715760
UniProt:
R7QEQ7
LinkDB
All DBs
AA seq
551 aa
AA seq
DB search
MASSSGAFKSREAWKAAKELEEARKAGTAPPAIDDDGKIINPHIPEYIAQAPWYIDQETP
SLKHQRNQKALKRNFDPLGKWLPRGETVGPAATKYRKGACENCGAMTHKKKNCLERPRRR
GAKLTGRNIRPDEAIASVNLDFAGKRDRWNGYDESTEYDKVLERYEKIEAERRALKVQKL
DAELRNRSKKQRPGKGNSDELSDGDDSDDSDSDMEKDGAVEQDAGQGSKMVVRNLRIRED
TAKYLINLNTDSAYYDPKSRAMRADPNPDINSDDKDYAGDNFVRYSGDVTKLAQMESHTL
KAAEAGRNLPHLQAEPSRAEALFKDFEAKKKGLDKRRQDEIREKYGGQEYAKLDPGIEGV
QQTEAYVEFSSDGRALKGAREIIPVSKYPEDILEKNHNAIWGSFYKDGNWGYGCCHSTQR
NCYCTGDAGKQAALATEADMAKRTEAAIAKRNPEPLTKQWEKLERERQENALPEEEALEK
EKEHQNEVAKQIRKQAHEERMMAELDTARGKHSRIGADDPGGMSKAAKEAYQLRKQMRDD
PMASYIPEKGT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctcaagtggcgctttcaaatcgagggaggcgtggaaagcagccaaggagctt
gaggaggctcgcaaagctgggaccgccccacccgccatcgacgacgatgggaaaatcatc
aaccctcacataccggagtacatagctcaggctccgtggtatatagaccaagaaacaccc
tcactgaagcaccagcgaaatcagaaagcgctcaagagaaattttgacccccttggcaaa
tggctcccacgtggggagactgtagggcccgccgcgacaaaatacaggaagggtgcatgt
gaaaattgtggtgcgatgacacacaagaagaaaaattgtctcgaaaggccgcgacggaga
ggtgcaaagcttactgggcgcaacattcgcccggacgaggccattgcctcagttaacctt
gattttgcaggaaagagggatcgatggaatggatatgatgaaagtactgagtacgataag
gtcttagagaggtatgaaaagatcgaagctgagaggcgggctctgaaggtgcagaagctg
gatgcggaattgcgcaatcgctcaaaaaagcaaagacctgggaaaggaaattcagatgaa
ctctctgatggggacgattcagacgactctgattcagatatggaaaaagatggtgctgtg
gagcaggatgctggtcagggctcgaaaatggttgtacgcaacttgcgaatccgcgaagac
accgcgaagtacctgatcaacttgaatacagactcggcctactacgaccccaagtcaagg
gcgatgcgggcagatcctaacccggatattaactccgatgacaaggactacgcaggtgac
aattttgtgcgatactctggggatgtaacaaaacttgctcaaatggagtcgcacacgctg
aaggcagcagaagcagggagaaatctgccgcaccttcaagcggagccctctagagcagaa
gctcttttcaaagactttgaggccaagaagaaggggctcgacaaacggcgtcaagatgaa
attcgggagaaatacggcggccaggagtacgcgaagctagatcccggaattgagggcgtc
caacaaactgaagcttatgttgagttcagcagcgatggaagggctctgaaaggagccagg
gagataataccagtgagcaagtatccagaggacattcttgaaaagaatcataatgcaata
tggggcagtttctacaaagatggaaactggggctacggctgctgtcactccacgcaaagg
aactgctattgcaccggtgacgctggaaagcaggctgcattggccactgaagcagacatg
gcgaagagaacagaagcagcgatagcaaaaaggaacccagagccgcttacgaagcaatgg
gaaaagctcgagagggaaaggcaagagaatgcattaccagaggaagaagccttagagaag
gaaaaggagcaccaaaatgaagttgcgaagcaaatccgcaaacaagcgcatgaggagcgc
atgatggcagagcttgacacggcgagggggaagcactcaagaataggagcagatgaccca
gggggaatgtccaaagcagcgaaggaagcatatcagttgcgaaaacagatgagagatgac
cccatggcttcgtacataccggagaaaggaacttga
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