Chondrus crispus (carragheen): CHC_T00004403001 Help Entry CHC_T00004403001  CDS       T02916                                  Name (RefSeq) hypothetical protein   KO K14005   protein transport protein SEC31 Organism ccp  Chondrus crispus (carragheen) Pathway ccp04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:ccp00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     CHC_T00004403001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccp04131]     CHC_T00004403001   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:ccp02044]     CHC_T00004403001 Membrane trafficking [BR:ccp04131]  Endoplasmic reticulum (ER) - Golgi transport   Forward pathways    Coat protein complex II (COP-II)     CHC_T00004403001 Secretion system [BR:ccp02044]  Sec (secretion) system   Eukaryotic Sec-SRP protein    CHC_T00004403001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EIPR1 TPR_Sec16 Beta-prop_EML_2 WDR55 Beta-prop_WDR35_TULP_N ANAPC4_WD40 Beta-prop_EML SRA1 Beta-prop_CAF1B_HIR1 MIOS_WD40 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_WDR19_1st Motif Other DBs NCBI-GeneID:  17323995 NCBI-ProteinID:  XP_005716292 UniProt:  R7QFG1 LinkDB All DBs AA seq 1246 aa AA seqDB search MGASETSFGPSASLELIAVDIQRSKLTPVSNIPSSHKFCAIEWGLPSRAHPFGLIASGLA DGTVRIFDAAPLIRQNAGSVNDESTAVVYGSATTTKRHTGPVKSLSFNSFLPTRLATGGA DGQVLVWDFNNVSAGPIARPLAESQATSNITQKEEITAIAWNRKVEHVLGTATNSGLLKV WDSNQGKRVLSIRNPRGRLRCSALEWHPEIATQIILACDEDQDSGATLWDLRNASAPVMS YTHHGPNGVSAMSWCPHDSDMLLTSSRDSRTVAVSVSTGEVLSEAPKTANWNFDVKWSPR IPGMYLSSSQDGTIAVNALMTTTTGPSVSSETANALAESFGEMAGGFQVGVQDQSPRAVD KPRVSYNLNRPPKWLKRPVSVSFGFGGRQTSLSSKGAGKVDIESFDESFSGLREACVELD TILLDMTADDPSPALRWCQQASAGSESAKDQMAWDALGMVFRQDCRRLVLKYLGFEPPSI EAGDDITMPVYGLPLSHALAIPVRSAPREIRTVSETLLNRADDIDAVTNGTGALNLDRPA PWEVTETRSGHDEVKASILDGDDSLAEVEETPTNKTNGVPGSKSQAGTSGSFVGKTREEI DVLVKKSVIVGDFKTAVEACLHVGRTADALIIAHAGGPDLWLETQAEYISNAGLSAGASI VGAIAGPKTKMDAYIRDAGNSGKESWKEALAVLMTYCPGEEISEACSSLGQRLLIAQNEA AALFCFICAGNTRMATTLWMRYRPLMAKPTSVMMADRIQRLSALVQKVRLLTAASTLGAG ERQIGAVKALDEVSGSVLCEYGALLASQGDASLAVMYLSNLDANYTCMYGSAEMIQAHAS EQLAMDDSATAASHNVASSSTPAYHPYNTGYSDSTYAYGNDGYSPGQAYGVASQPQYGAV SGALPPAPMAVPAPSFGATPPGPERYSSSLPPIPSNPVASRPTPPSVFASGAPSAERPFY DASAAYASVPAYGQDMYRAPPPPAPIVPAAIGAPSTGSYASPIPAGTAATAPLAPPPVGG RTAAPPIQGGTYGLEPPMGVVNTNLGLQTQSLAAPAPPPPPPNDATSSPPMSYHAKARPG SGASLPPSAEVAVAEQRRSRPMSSSGTPGGPPRRSTSTSSSLSALGSETVLLEKADVSKV PADQQVIVNSFRGAYMYALNQNSSPSYKRKMADVNKKLGRLLAGLNAGLVEAPVVELLIE VGSSIEKGNYDQATTVVKTLTKQHWDQNAQWIRGLKRLIDCVLTGR NT seq 3741 nt NT seq  +upstreamnt  +downstreamnt atgggagcttcggaaacttcgtttggaccatctgcctccctcgaactcattgccgtcgac atccagcgctcaaagctcacacccgtatcgaatattccttcctcacacaaattttgcgca attgaatggggacttccttctcgtgcacaccctttcggcctcatcgcctccggcttagct gatggcacagtacgaattttcgatgcggcgccgcttatccgacagaacgcgggttccgta aatgacgagagtacagcagtcgtctatgggagcgctacaacgacgaagagacatacggga ccagttaagagtctttcgtttaattcatttttgcccaccagacttgcaactggaggagct gatggtcaagtgctcgtgtgggattttaacaatgtatctgctgggccgattgcgagaccg ctggcggagagccaagcaacaagcaatatcacgcagaaagaggagatcactgccatagca tggaaccgcaaagtcgagcatgttcttggaacagcgacaaattcgggtcttctcaaagtc tgggactcaaaccagggcaaacgtgtcctaagcattagaaatcctagaggaaggttaaga tgctccgctcttgaatggcatccagagattgcaacccaaatcatacttgcttgcgatgag gatcaagacagcggagctacgctgtgggacttgcgaaacgcctcggctccagtaatgtct tacacgcatcatggtccgaatggcgtttctgcaatgagttggtgtccgcatgactctgat atgcttttgacgtcttcccgggattctcgaactgtagcggtttcagtgtcaactggagaa gtgctctcagaagcacccaagacagcaaattggaactttgatgtcaagtggtcaccgcgc atcccgggtatgtatctatcctcctcacaagatggcacgatcgcagtaaatgcgctgatg acgactacgactggaccgtcagtttcgagtgagaccgcaaatgcgttggcagagtcgttt ggtgagatggcgggtggtttccaggttggcgtgcaagaccaatcccctcgcgccgtcgat aagccgcgagtttcgtacaatttaaatcgaccaccgaagtggttgaaaaggccagtttca gtttcgttcggattcggaggtcgacagacatccctgtcaagcaagggcgccgggaaagtg gacatagagtcatttgatgagagtttctctggattgcgtgaggcctgtgttgaacttgat acgattctattagacatgacagccgatgatccttcccctgctctgaggtggtgccagcaa gctagcgcaggtagtgaaagcgccaaagatcagatggcttgggatgccctgggaatggtt ttccgacaggactgcaggcgattagttctgaagtaccttggatttgagcctccgtcaata gaagctggagatgacataaccatgcctgtatacggactgcctttatcacacgctctggcc attccagtccgatccgctccacgagaaatcaggaccgtttctgagaccctcctcaaccgt gcagacgatatcgacgctgtcacgaacggcactggggcattgaatttggatagacctgct ccatgggaagtaaccgaaactagaagtgggcatgatgaagtcaaagcaagcatcttagac ggtgacgatagtttggccgaggttgaggaaactccaacaaacaagacaaatggtgttccg ggatcgaagtctcaagcaggtacatcaggatccttcgtagggaagacacgggaagaaatc gatgttttggtgaagaaatcggtgatagtgggggatttcaaaactgcagtagaggcatgt ctgcacgtcggtcggacagcagatgcgctaattatagcgcatgcaggtggccctgatctt tggctggaaacccaagcagagtacatctcgaatgcaggcctttcggcaggtgcgagcatc gttggggccattgctggaccaaagaccaaaatggatgcctatattcgcgacgcgggaaac tctgggaaggagtcgtggaaagaagcactggcagttttgatgacatactgccctggggaa gagatatcagaagcctgctcttcccttggacagcgccttctcattgcacagaacgaagcg gctgccttgttttgctttatctgcgccggaaacacaagaatggccacaacgttgtggatg cgctatcgaccattaatggcgaagccgacttctgtgatgatggctgacaggatacagcga ctttctgctctggtgcaaaaagtccgtctattaactgcagcctctaccttgggtgcgggg gagcgtcaaatcggagcggtgaaggcattggatgaagtaagtggatctgtactgtgcgaa tatggggctctcttagcaagtcaaggcgacgcatccctggctgtcatgtacctgagcaat ttggatgccaactatacatgcatgtatggttcagcggagatgatccaagctcatgcttca gagcaattggcgatggacgacagtgcgacagctgcaagtcataatgtcgcaagcagttca actcctgcttatcacccgtacaacacgggatatagtgattccacatacgcttatgggaat gatggatattcgcctggtcaggcatatggggtagccagtcaaccacagtatggagcagtt tctggtgccttaccgccagccccgatggcggtccctgctccgtcgtttggggcgacacca cccgggccagaacgatattctagttcgctaccaccgattccttccaatccggttgcttct cgaccgacgcctcccagtgtattcgcttcaggggccccatctgcggagcgcccattttat gatgcgtcggcggcttacgcgtcggtccctgcgtacggacaagacatgtaccgagcacct cctccacccgctccaatagtccctgctgcgatcggagccccatccactggttcatatgca tcaccaattcccgcgggaactgcagccacggcgccattagccccgcctcctgtcggtggt agaacagctgcaccgccaatacaaggcgggacctatggtctggaacccccaatgggagta gtgaatacaaatctgggacttcaaacgcaatctcttgcggcgccagcaccacctcctccc ccgcccaacgacgcaacgtcgtctccgcctatgtcttaccatgcgaaggcacgaccaggt tcgggagcttcactaccaccgtctgctgaggttgcggtagcagagcagcgtcggtcaagg cccatgtcgagttcagggactccaggtggtccaccgaggcgatcgacatccacatcgtca tctctttcagcattgggctcggaaactgtgcttttggaaaaggcagacgtctcaaaggta cctgctgatcagcaagtaattgtgaactctttccgaggggcttatatgtacgctttgaat cagaattcatcgccctcatacaaacgaaagatggccgacgtaaacaagaagttagggaga cttctggctggtcttaacgctggcctagttgaggcgccagtagttgagctactaattgag gtcggttcgtctattgagaaggggaactatgatcaggcgactactgtcgttaagaccctc acgaagcagcattgggatcaaaatgctcaatggattagaggcctgaagcgccttattgat tgtgttctaactggaaggtga

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