Chondrus crispus (carragheen): CHC_T00004763001
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Entry
CHC_T00004763001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccp04121
]
CHC_T00004763001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccp04147
]
CHC_T00004763001
Ubiquitin system [BR:
ccp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
CHC_T00004763001
Exosome [BR:
ccp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CHC_T00004763001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP120
TPR_CAND1
HEAT
CandA_N
HEAT_GCN1
HEAT_2
HEAT_MROH2B_C
HEAT_Maestro
HEAT_Maestro_2
HEAT_GCN1_2
TPR_DNAAF5
HEAT_EF3_N
MMS19_C
HEAT_GCN1_C
RELCH_C
DUF6437
Motif
Other DBs
NCBI-GeneID:
17324052
NCBI-ProteinID:
XP_005716338
UniProt:
R7QEN8
LinkDB
All DBs
AA seq
1262 aa
AA seq
DB search
MKLLHDTNSEVQGMAMKCLGPLARFVEVVYATYLVDKLLEYIVDSSASKAKAGSPENLSV
KAMRDVSSLGLKAILAELPPDSVKAAAVTKCMAPKLIRTIRVTKAVGDAVDLLIETFELM
NDMLNRVGSHMTDLYPEISDAIFRQLPSSSALITKRAVLCIGALGSSCENSLFIAMVERA
LADLRSNDSRTDTIKTGVQIIWALSKTSGHRLAVHVEALAPILFEYCTSENYADDEELRE
HCLQALASFCLRCKREMMGFGKTLAECVINSARYDPNYAGGEEEEEQEEDDETGMGDDDD
MDNEYDDEEDYSDDDDNSWKVRRAAIRCLHAALSVELMPREYLFRDFGPFLITRFKEREE
PVKLDVFAAFSELLRLSGSQSHQHLFHSGAMHLEIDIGDAMAVDADEGVSDEMRPIVSRG
PQIMRTLKKELSSRSLKTRIKTMALLRDCVSTMPSVMTPLIGKIISEIEQGMSDSATAMK
TESLLLLRGMVHSGGANGISGHLQTLIPRILAATDDRYYKVTAECLRLCGDLLISFGRAS
SEFRSLLAPFASRMHDAALGRVTAQDQDSEVKEAALRCLGASVSFFGSELGPQRVTSIAN
VLCDRLASEVTRLPTVRALYAIATSESAKVLLPVMSDVTMTVGGFLRKNNPSLRAASLDL
LATAPSLPPEGDSALIANISQLVTDSDLRLTCMALQLAIRLLRARGAEVAGEMAKQNSIY
SRGLGLVASPLLQGKSVDALILLFRTLAEINQEPLTTESMLTDLMSLSSSLGTSAVTVTG
RASALYCVAKCLVAVCDSADPSSRAKTAEKIVANLEVQDLNIRIFSVICLGEFGRSSVTA
KSEVERTNLQTAIMAALDAPEAEMRTAAAIALGGMTAAGGASGIPSLLNLIRLRPDQRYL
LLLSLKEAISYSNSVDLAPVVSILIPLLFEEQVASTNASTAAVNSEGSQGVRVSEESVRT
ATAECLGLLSRASPEEVMKALVDGTSSERADIRASVASAVKFAVSSSPSHRQPLLSALRS
SVSAFIQLIGDPDVQVAKSALQAVNAIAKSQPSVLIPHLSATQQFIFARLVKNKSLVRVV
DLGPFKHEEDFGLDMRKSAFDCMRTFVSGPLCASLSLNTLVQNILVGLGDHADVRSIAQL
ILATAAATPDAPQLNDIMDNIVAALQATFNEKVKQNAVRQETERHDDSIRGALRAIRMLE
TVPEIAMNRRFQAFMTNVVRTSRFLEKYEAIGRSDVEQMTFGNMSGAQRGVSAESDIAMT
DR
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgcacgatactaacagcgaggtccaaggcatggctatgaagtgccttggc
ccgctcgcccgttttgtcgaagtagtgtacgccacctacctagtcgataagcttttggaa
tacatcgtcgacagttctgcttcgaaagccaaggccggctctccggaaaacctcagcgtc
aaagcgatgcgcgatgtgtcctcgctcgggctcaaggctatcctagcagagctcccaccg
gattcggtaaaggccgccgccgtaacgaagtgtatggccccgaagctcatccgcactatt
cgcgtcacaaaggcagtgggcgatgctgttgatctactcattgagacctttgaactcatg
aatgatatgctcaaccgtgtgggaagccatatgacagatctatacccagagattagcgac
gccatttttagacagcttccttcttccagtgccctcattacgaagagggctgtgctgtgt
attggggcattaggttcttcgtgtgagaactcgctctttattgccatggtcgagcgagcg
cttgcagatttgcgctccaacgattcgcgtaccgatactatcaagacgggcgtgcaaatc
atctgggcactctcgaagacgtctggacatagacttgcagtccacgtcgaagcccttgct
ccaattctgtttgaatactgtacatcggagaactatgccgatgatgaggaactacgagaa
cattgccttcaggccctagcttcattctgcttgcgttgcaagcgtgagatgatgggattc
ggaaagacattggctgagtgtgtaataaattccgcaaggtacgaccccaactatgccgga
ggtgaggaggaggaggagcaagaagaggatgacgagacggggatgggagatgacgacgac
atggacaacgagtacgatgacgaggaagactactctgatgatgacgacaacagctggaaa
gtgcgacgagcagcgattcgatgcttacacgcagccttaagcgtggagttgatgccgcgt
gaatacctattccgggactttggtcccttcctaatcacccgtttcaaagaacgagaggag
ccggtgaagctagatgtctttgcggcgttttcagaattgttgcggctgagcgggagccaa
tcccaccagcacctcttccattcaggtgctatgcatttggagattgacatcggcgacgcc
atggccgttgacgccgatgagggagttagtgatgagatgcgtcctattgtaagccgcgga
cctcaaatcatgcggaccctgaaaaaggagcttagctctcgctctttgaagacccgtatc
aaaactatggcactactgcgtgactgtgttagcacaatgccgtctgtcatgacaccactg
atcggtaagataatttccgagatagaacagggtatgtcagattcagctacggcaatgaag
acggagtcgctgcttctccttcgcggaatggtccatagcggcggtgcaaatggtatcagt
ggtcaccttcaaacattgattccgcgaatccttgcagcaactgatgaccggtactataag
gttactgccgagtgcttgcgtctctgcggggatttgctgatatcttttggaagggcctct
tctgagtttaggtctctgcttgcacctttcgcttcgagaatgcatgacgctgcccttgga
agggtcactgcacaagatcaagattcagaagttaaggaagctgctctacggtgtcttggt
gcctcagtgtcctttttcggttctgagttggggccgcaacgcgttacaagcattgcgaat
gtactgtgcgatcggcttgcgagtgaagtgaccaggctgcccacagtgcgtgctttgtac
gcgatcgcgacgtccgagtctgcgaaagtactcctgcccgtcatgagtgatgtaacaatg
actgtgggaggctttctacggaaaaacaatccatcgcttcgagcagcatctttggattta
ttggccactgcgccctcgcttccaccagaaggtgattcagccttgatcgcaaacatcagc
caactagtgacggactcagacttgcgcctgacatgcatggcattgcagcttgctattcgg
cttctgagggcgcggggtgcggaagtagctggagagatggccaagcagaattctatttac
tcccgaggtcttgggttggttgcttcacctttactccaggggaagtccgtagatgccctg
atattattgttccgcacactggcagaaattaatcaagagcctttgactacggaatccatg
ctgacagatctgatgtctctgtcgagttcactggggacaagtgcagtgacggtgacaggc
cgtgcgtctgctctgtactgtgtagcaaaatgtcttgtcgcagtttgtgactctgcagac
cccagctcgagggcgaaaactgcggagaagattgttgcgaacctagaagtccaggatctg
aacattcgtatcttttcagtcatatgccttggcgagttcggtcgaagctccgttacagcc
aagagcgaagtagaaaggacaaatctacaaactgctatcatggcagcgttggatgcccct
gaagctgagatgcggactgctgcagctattgctcttggtggaatgactgccgctggtggt
gctagtgggataccctccctcctgaacctcatcaggcttcgtccggatcaacgatatttg
cttctcctgtcgttgaaagaagcgatttcatattcgaacagtgtggacctggcccctgtt
gtctcgattttgattccattgttgtttgaagagcaggttgcatcaacgaatgcgagcact
gcagccgttaactcagagggcagccagggggtgcgtgtatccgaggagagcgtccgaact
gcaacggcagaatgccttgggttactgagtcgtgcttcacccgaagaagttatgaaagct
ctagttgacggaacgtcatcagaacgagcagatattcgtgcgtctgttgcttctgcggtt
aaatttgccgtgagctcaagcccatctcaccgacagccgttgctttctgcgctccggtca
tcagtttccgcttttattcaactcattggcgaccctgacgttcaagtggcaaagagtgcc
ttgcaggctgtaaatgccatagcaaagtcacaaccttcggtattgatcccgcatctcagt
gctacgcagcaattcatatttgctaggctagtgaaaaacaaaagtcttgtgcgtgttgtg
gatcttggtcccttcaaacacgaagaagattttggcttggacatgcgcaaatcagctttc
gactgcatgagaacgtttgtcagcggaccgctctgtgcatctctgtcgcttaacactctt
gttcaaaacattctggttggtctaggagaccacgcagatgtacggtcaatagcgcaactt
attctagcgactgccgctgccacgccagatgcgccccagctgaatgatattatggacaac
atagttgcagcattacaagcaacttttaatgaaaaggtgaaacagaatgctgttcgccaa
gaaacggagaggcatgacgactccatcagaggagctctgcgggcgataagaatgttagaa
acggtaccggaaattgcgatgaatcgtcgcttccaggccttcatgacaaatgtggtgcga
actagtcgttttctagaaaagtacgaagccatagggcgtagtgacgttgaacagatgaca
ttcgggaacatgtccggggcgcagcgtggagtgtcggctgaatctgacattgcaatgact
gatagataa
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