Chondrus crispus (carragheen): CHC_T00004972001
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Entry
CHC_T00004972001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K19998
sec1 family domain-containing protein 1
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00004972001
Membrane trafficking [BR:
ccp04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
CHC_T00004972001
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
CHC_T00004972001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
17324512
NCBI-ProteinID:
XP_005716801
UniProt:
R7QER7
LinkDB
All DBs
AA seq
684 aa
AA seq
DB search
MYSLIPSDASGARLSVQERQRAVLEQMLSACASTSDVTDDGSDVWKVLIYDAAAREIIAP
LLRVADLRARGVTLHMMLHSARHAIPDVPAVYLVAPTEENVRRICADSAKGMYASLWVNF
TTRVSRELLETLAEGVAAAPVARQTNSLVAAPGAIARVYDMYADFLTLEDNLFSLNLPGL
YTGLTATNVSNADVEACVNTIVDKLFCAIVTLAAVPVIRAQRGGPAQLVATLLERRIREH
LIASNNIFSESGGSFSATAVTRPLLVIVDRSIDLSVMLHHTWTYQALAHDTLGLKLNRVT
VPVKDAAGAMPGMPPPMKKRVFDLDKSDFFWAENAGLPFPKVAEAVETSLQRYKEEVADL
NRTAGTVGENAIDPMTADVKDENTANKLAAAISSIPELTKKKRMIDLHTNIATALLDQIK
DRGLDGYFQVEEELLTRPGTFDVGRVLALLRDARGTPTDKLRVFLIFYLCVDSATDAELS
RCTAALQAAGCTDLRAYSYLKSIRAFTKSISSVPAAPLTTSSSIGSGYAASVLDTLSQVA
NNVNKLIISADKALAAARVVQTLMEQKGDTEILEGYLTLDPKAPKGSVGHAGKPAKEAIL
FVVGPGNYIEYQNCQDHVCSVVKQDGKNSTLVPNGKTLIYGATELCTGAEFLQQLHANGG
PKPSPPVNGTGGSGALDRSNSTKL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtattccctcatcccctcagacgcttctggcgcccgtctctccgttcaggagcgccag
cgcgccgtcctggagcagatgctctcggcctgcgcctccacctccgacgtgaccgacgac
ggatccgacgtgtggaaggtcctcatctacgacgcggccgcgcgcgaaatcatcgcccct
ctgctccgcgtcgctgatctgcgagcgcgcggcgtcacgctgcacatgatgctccactcg
gcccgccacgccatcccggacgtcccggccgtgtacctcgtcgcccccacggaagagaat
gtgcgccgcatttgcgcagactcggcaaagggcatgtacgccagcctctgggttaacttc
accacacgcgtgtcgagggagctgctcgagaccctcgcggagggcgtcgccgccgccccg
gtcgcgcgtcagactaactccctggttgctgccccgggcgctatcgcgagggtctacgac
atgtacgcagactttttaaccttggaggataacctgttttccctcaatttgcccggcttg
tacaccgggctcaccgcgactaatgtctctaatgccgacgtcgaggcctgcgtgaatacc
atcgtcgacaaactcttttgcgctatagtcacgcttgcggcggttcctgtcatccgcgct
caacgaggcggccctgcgcagctcgtggccacactgctggaaaggaggatcagggagcac
ttaatcgctagcaacaacatcttctcagagtcgggcggctccttttcagcaacggctgtc
acgaggcctttgctcgtcatcgtagatcgcagcatcgacctttccgttatgctacatcat
acatggacatatcaggctctcgcacatgatacactgggacttaagcttaatcgcgtcacg
gtaccggttaaagatgcagccggggcgatgcctgggatgccaccgccgatgaagaagcga
gtgtttgatttggataagagcgatttcttctgggcagagaatgccggcttgccatttccg
aaggttgccgaggctgtcgagacgtccttgcagcggtataaagaagaggtggcggaccta
aatcggacggcagggactgttggtgagaatgccatcgaccccatgactgctgatgtcaaa
gatgagaacacagcaaataagctcgcggcggctatttccagcattccggagttaacgaag
aagaagcgcatgattgatttgcatacaaacattgcgacggcgctactagaccagatcaag
gaccgcggacttgatggatatttccaggttgaggaagagctgctgacgagacctggcacg
tttgacgtagggcgcgtgttggcgttgctgagggatgcgaggggtacgccaacagataag
ctccgagtcttcctcatattttatttatgtgtggatagtgccactgacgcagagttatcg
cgctgcacagctgccctgcaagcggctgggtgcacagatttgagggcatacagctatctg
aaaagcattcgggccttcacaaagagtatttcgagcgtgccagcagccccgcttacgacc
tcatccagtattgggagcgggtatgcagcatctgtgctggacactctgtctcaggtcgca
aacaatgtgaataagttgatcatttccgcagacaaagcgctcgcggcagctcgagtcgta
caaactctaatggagcagaagggtgacacagaaattttagaaggatacttgacattagat
ccaaaggctccaaagggtagcgtgggacacgcagggaagccagcgaaggaggctatctta
ttcgttgtggggcccggcaattacattgagtatcaaaactgtcaagatcacgtttgctcg
gtagtgaaacaagacggcaagaattcgacactcgtacccaatggcaaaacgttgatatac
ggagctacagagctctgcacgggtgcagagtttttgcaacaactacacgcgaacggaggc
ccaaaaccatctcctcctgttaatgggactggaggctcgggcgccctagatagatctaac
tcgacaaaattgtaa
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