Chondrus crispus (carragheen): CHC_T00005051001
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Entry
CHC_T00005051001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14320
aladin
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHC_T00005051001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00005051001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CHC_T00005051001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
PD40
Beta-prop_EIPR1
Ge1_WD40
WDR55
Motif
Other DBs
NCBI-GeneID:
17324242
NCBI-ProteinID:
XP_005716535
UniProt:
R7QGW8
LinkDB
All DBs
AA seq
399 aa
AA seq
DB search
MSGMGSLDPRYLCVLRVHRPFFLGGRARPAAIVRKPNEGHGVLAPLGNAFNSWFGKPEQP
CETQTALLSWHWAEDLIAVATGARLDRICAFSFQNGVWEIAGQRVPMFQGTRCLAFRPFA
GRVLAIGCDDGVVLLRGTKTEHLRAPGHTHVVSLDWSSDGSKLATASAADGLVRLWDVGT
GKSMVVDRGGLVCFSRGAGGRFLFVASAVSNFFRLWCTETWTMERWGYLSGPVAAVTWSP
DGMALFFSTHGESAIHVISIGGPRIDDDTKVIHTEHTELPEKGGPGGTPVLLEMDNTGER
LAVAYETPQEELESGGGLHNEDFRTDPNRRHVVALYATQLQPTFRISPVGYVSGPEESGP
PVGIKFNSRGNANKLTVLSCMWRSGDVTCTQLLFNPYRQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcatgggcagcctggatccgcgctacctgtgcgtgctcagggtgcacaggccc
ttctttctgggcgggagggcccgtccggcagccatcgtgcgcaagccgaacgaggggcac
ggcgtgctagcccctctggggaacgccttcaactcgtggtttgggaagcccgagcagccg
tgcgaaacgcagaccgccctcctttcatggcattgggctgaggacttgattgccgtcgcc
acgggcgcccgcctggatcgcatatgtgcgttcagctttcaaaacggcgtgtgggagatt
gcggggcagcgagtcccgatgtttcaggggaccagatgtttggcgttccgcccgttcgcg
gggagggtgctggccatcgggtgcgacgacggcgttgtgctgctgagggggacgaagact
gagcacttgcgcgccccagggcacacgcatgtcgtgtcgctggattggtcctcggacggg
agcaagctggcgacggcatcggcggcggatggcttggtgaggctttgggatgtggggaca
ggcaagtccatggtcgtagatcgcggcggcttagtctgctttagccgcggggcggggggg
aggtttttgttcgtcgccagtgcagtcagcaactttttcaggctgtggtgcacggagacg
tggacgatggagaggtggggatacttgtcggggcctgtggcggcggtgacatggtcgccg
gatggcatggcgctgttcttctcaacgcatggggaaagtgcaattcatgtgatcagtatt
ggcggcccgaggatcgacgatgacaccaaggtgatacataccgagcacacggagctgcca
gagaagggagggccggggggaacgccggtgctattggagatggataacaccggggaacgg
ttggcggtcgcgtatgagacgccgcaagaagagctcgagtcaggcggcgggctgcacaat
gaggattttagaactgacccaaatagaaggcatgtagtagcgctttatgcaacgcagttg
cagccgacgttcaggattagcccagtcggatatgtgtcggggccggaggagagtggaccg
ccggtggggattaagtttaactcgagggggaatgcgaacaagttgacggtgctgtcgtgc
atgtggcgcagtggggatgtgacctgtacacaacttctgttcaacccttatcgacaatga
DBGET
integrated database retrieval system