Chondrus crispus (carragheen): CHC_T00005059001
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Entry
CHC_T00005059001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14003
prolactin regulatory element-binding protein
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CHC_T00005059001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00005059001
Membrane trafficking [BR:
ccp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
CHC_T00005059001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_Vps41
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Caa3_CtaG
Apolipoprotein
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
17324213
NCBI-ProteinID:
XP_005716496
UniProt:
R7QDT5
LinkDB
All DBs
AA seq
498 aa
AA seq
DB search
MEVLDDGCFAIVGGGGRMKSGIPNACEVLSLDEQTHSLEQRASVSLDDAPVSVASHGRIL
ITAMGTGCKNLIRKQPETLVPLSSFHHDVQVSAADEQVAVTVAPSGSRLAVASDDGHLTI
IQLPHYDLLTSKQLHSQGITDLSISFDGALLATTARDRAAYVCKTDSIEIVQRIRPVMPE
ATRTHVRAIRFAPKDPSVLFTVESNPRKGGWVAVWRSRNQDGGNWSPVSCLKASRDAVTA
FAVDSSAEFLALSSSEGHVSVFKWNATSLSRLWSTEANMLSWGPGTPPHVLPVTALAFTK
SSEHLLTASADYTVAVWSTRRKRNWRIPRRVLLWFVGVVVLMFAMLLVEDEQLNLVLRET
RSRITPRLEPFASELQTRMRPLVHKGSESLRPFVRQVQKSSCSSLSLLRGKAKPITKRWE
EFQGVWRALTERARDSFDGKFKRGARPLGGSKAIMTVLGSHSAEMLQISKEEQAVCTMDD
LRATPESNHENLESQTRS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcctcgatgatggatgttttgcgattgttggtggtgggggccgaatgaagagc
ggaatcccaaacgcatgtgaagtgttatccttagatgagcaaactcattccttggaacaa
cgtgcttctgtatccctagatgacgcccctgtctctgtagcctcacatggacgcattctt
atcactgctatgggcactggttgcaagaatcttatccggaaacagccagagacgttggtg
ccgctatcgagttttcatcacgatgttcaggtttcggccgccgacgaacaggtagctgtt
acagtggctccaagtggttctcgtttagctgttgcatctgatgatggccacctcactatt
atacaactcccacattatgatttgttgacttccaagcaactgcattcgcaaggcattaca
gacttatccataagcttcgatggcgcgcttctagcgacaaccgcacgagatcgtgctgct
tatgtgtgtaagacagactctattgagatcgtgcaaagaattcgacctgttatgccagag
gctacgcgcacacatgtccgcgctatccgttttgcgccaaaagatccttctgtgctcttc
actgttgagagcaatccgcggaagggtggatgggttgccgtctggcgctcaagaaatcag
gatggaggaaactggagcccagtgtcatgtttgaaagcgtcgagagatgcggtgacggca
tttgcggtagactcgagcgctgagttcttggcactgagttcctctgagggtcacgtatcg
gtcttcaaatggaatgccacatctttgtcgcggttgtggagcacggaagcgaatatgcta
agttgggggccgggaacgcctccgcacgtgctacccgtcaccgctctggccttcacgaaa
tcttctgaacacctactcacagcttctgctgactacactgtcgctgtgtggtctacacgg
agaaaacgcaactggagaataccacgtcgcgttcttctttggtttgtcggcgtagttgta
ctcatgtttgccatgcttctcgttgaggatgagcaattgaatctcgtcctgcgagagacg
cgaagtcgcattacgccccgccttgaaccatttgcatcagagcttcaaacccgcatgagg
cctctcgtacataagggttcggagtctctacgcccgttcgtgcgacaagtccagaaatca
tcatgttcaagcctttcgttactccgcggcaaagccaaaccaattacaaaacgttgggaa
gaattccagggggtctggcgagcattgacggagagagctcgggacagtttcgatggtaag
tttaagcgcggcgcgaggcctttggggggctcaaaagctatcatgacagtcttaggaagc
cactccgctgaaatgctgcagatttcaaaagaagaacaggctgtatgtactatggatgac
ttgagggcgacgccagaatctaatcatgagaatctagagtcacagactagaagttga
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integrated database retrieval system
