Chondrus crispus (carragheen): CHC_T00005102001
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Entry
CHC_T00005102001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14830
protein MAK11
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00005102001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CHC_T00005102001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR41
DSE1_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
ASA1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
eIF2A
CDC45
Motif
Other DBs
NCBI-GeneID:
17324740
NCBI-ProteinID:
XP_005716957
UniProt:
R7QHB0
LinkDB
All DBs
AA seq
369 aa
AA seq
DB search
MVANPSEEKPAAGTNICVGGYDGSVAGLTLRPDAEDLLSLQATFAYASHITAVRSAALSG
STLVTGSADETVRIYDLARRVERGSLFEHSGTVNALVFFRDGPRRLLMSAGDDALMCVWR
TSDWKCLKRMHGHQAPVLDVAVHPSARVALSVAKDRSLFMWNMVKGKIAFSAKTKETPAT
TVEWAPGGERYMLVAGKSVKLSNVEGKDVETFVHERPVLAAAFVKEGVLATGGEDKIVRV
WDQRTGGCVIACKHEKRVRGVACVDGLVVAADSGGGVKIWDARMGGSARLETCLGGGDMR
LTCLAAAKEVEEVEKVPKTEEEEEGETKDEGRQEKGKGARRKRREERPAPLEGTASQRKR
KKRKEQKAS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggtagccaatccatccgaggaaaagcccgccgctggaaccaacatctgcgttggtgga
tatgacggcagcgtggctggtctcacgctgcgccccgacgccgaggaccttctgtctctc
caggcgaccttcgcctacgcctcgcacatcaccgccgtgcgcagcgccgccttatcgggc
tccactctcgtcacgggcagcgcagacgagaccgtccgcatctatgacctggcccgccgc
gtcgagcgcggctcgctcttcgagcactccggcaccgtgaacgcgctcgttttcttccgc
gatgggccacgccgcctgctcatgtcggccggtgacgacgcgctcatgtgcgtctggcgc
acttccgattggaagtgtctcaagaggatgcatggtcaccaggcgcccgtgctcgacgtc
gctgtccaccccagtgcgagagtcgccctgtccgtcgcgaaggatcgctccctcttcatg
tggaacatggtcaaagggaaaatcgccttctctgccaagaccaaggaaactccagccacc
acagtcgagtgggccccgggcggggagaggtacatgctcgtggccgggaagagtgtcaag
ttgtctaacgtcgaggggaaggatgtggagacgtttgtacatgaacgtccggtcctggca
gctgcgtttgtgaaggagggcgtgttggcgacaggtggggaggacaaaatcgttagggtg
tgggatcagaggacggggggatgtgttattgcgtgcaaacatgagaagagggtcagaggg
gttgcgtgcgttgatggcttggtggtagccgcggattcgggaggaggggttaaaatttgg
gatgcgcggatgggagggagcgcgaggttggagacttgcctgggtggcggggatatgagg
cttacttgtttggcggcagcgaaggaggtagaagaggtggagaaggtgccgaagacggaa
gaagaagaggaaggggagacgaaagacgagggaaggcaagagaaaggcaagggtgctcgg
cggaagcgcagggaggagcgaccggctccgcttgagggcactgcgtcgcaacgaaagcgc
aaaaagcggaaggagcagaaggcctcttga
DBGET
integrated database retrieval system