Chondrus crispus (carragheen): CHC_T00005159001
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Entry
CHC_T00005159001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K04523
ubiquilin
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CHC_T00005159001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00005159001
03051 Proteasome [BR:
ccp03051
]
CHC_T00005159001
Membrane trafficking [BR:
ccp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
CHC_T00005159001
Proteasome [BR:
ccp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
CHC_T00005159001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
UBA_HOIP
Ubiquitin_2
UBA_7
CUE
DUF6972
Rad60-SLD_2
HRI2_3H
Ddi2_HDD
Elf4
Motif
Other DBs
NCBI-GeneID:
17324720
NCBI-ProteinID:
XP_005717022
UniProt:
R7QHF8
LinkDB
All DBs
AA seq
546 aa
AA seq
DB search
MALNIIVKNTTGTRFEMQISSLAETVADFKVRLATSTGIPAASQRLIFRGHILKDAQTFE
QIKAKHGLESGQSMHVVPSPSSAPSASANATPSTPTAPSSNQTNAAPAPQLPTGMPNMAE
MQQQLLQNPEQMQAMMNSPLMENIMNNPQVARSLMMANPQMRDLLDRNPELAHVFNDPAT
FRQMMQMARNPSLMNEMMRNTDRQMANIEMMPGGFDALRRMHENIQAPLMDATQGFNPGN
QTNANRPNAADDNPFASLFQQNTPSNTPMPNPWAPNNGVQPNAAPRAQPTMNTGATAGTA
NGNAFAQLFQGVGGADNGAAGGTPGVMPGFPGMGMGTGGMPGLPPGMDIEQLTQLMENPM
MQQMMDSLLSNPQTLQAMINSDPSMRAAMENNPQMAQVLQNPEMLRTMMNPEVMRSMRQL
QNAFGGMGMGATPGATPTPPGTGAGQTPNTGQTPSPTPQATGGMDAGAQMNGFMAMMNAM
AAGGAPGANTAQPQMTQEQLEEMYSTQLQQLRDMGFLDKSMCLQALQQSRGNVSAAIENL
LSRFGG
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaaacatcatcgtcaagaacaccacgggcacccgcttcgaaatgcagatttcc
tcgctcgccgagactgttgccgacttcaaggtccgtctggccacctcaacaggcatcccc
gccgcctcgcagcgcctaattttccgcggtcacatcctcaaagacgcccaaactttcgag
cagattaaggccaagcacggcctggagtctggccagagcatgcatgtcgtcccgtccccg
tcttccgctccctctgcgtccgccaacgcgacaccctccaccccgaccgcaccgtcgagt
aaccaaacaaacgccgccccggcaccgcaactccccaccggcatgcccaacatggctgag
atgcagcagcagctgttgcagaacccagagcaaatgcaagccatgatgaactcccccctc
atggaaaacattatgaacaacccgcaggtcgcacgcagtttgatgatggccaatccccag
atgagagacctgctcgacagaaatccagagctggcacacgtctttaatgatccggctacg
tttcgccagatgatgcaaatggcaagaaatccctcactcatgaacgagatgatgaggaac
acggataggcagatggccaatattgaaatgatgccgggcggctttgatgcgctgcgtcgc
atgcacgaaaacatccaggcccctttgatggacgctactcagggcttcaacccaggcaac
caaacaaacgcgaatcgccccaatgccgcggatgacaacccttttgcatcgctattccag
cagaataccccgtcgaatacgccgatgcccaacccatgggccccaaacaatggcgtccaa
cctaatgccgccccgcgagctcagcccactatgaacaccggcgccacagctgggactgcc
aacggtaacgcttttgcgcaattgtttcaaggtgtgggcggagcggacaacggcgctgcg
ggtggtacgccgggggttatgcccggctttcctggtatgggaatgggcaccggagggatg
ccgggtttgccgccaggaatggacatagaacagctcacccaattgatggagaaccctatg
atgcaacagatgatggatagtttgctgagcaatccgcaaaccctgcaagccatgatcaac
agcgacccctccatgcgcgccgcgatggaaaacaacccgcaaatggcccaagtccttcaa
aacccggagatgttgcggaccatgatgaaccccgaggttatgagaagcatgcggcagctg
caaaatgctttcggtggtatgggcatgggagcgacgcccggcgcaacgcccactccaccg
gggacgggcgctggtcagacgcccaacacgggtcagacgccatcccccacaccacaagcg
actggaggcatggatgcgggggcgcagatgaatggctttatggcgatgatgaacgccatg
gcagctggaggggcaccgggggccaacaccgcgcaaccacagatgacgcaggaacagctt
gaggaaatgtatagtacccagcttcagcagctccgggatatgggcttcttggacaagtcc
atgtgcctccaagcactccaacaatcacggggcaacgtctcggcagcgatcgaaaatctt
ctcagcaggtttggagggtag
DBGET
integrated database retrieval system
