KEGG   Chondrus crispus (carragheen): CHC_T00005178001
Entry
CHC_T00005178001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K12829  splicing factor 3B subunit 2
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHC_T00005178001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccp03041]
    CHC_T00005178001
Spliceosome [BR:ccp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CHC_T00005178001
 Complex B
    CHC_T00005178001
 Complex C
   U2 SnRNP specific factors
    CHC_T00005178001
SSDB
Motif
Pfam: DUF382 PSP AsnC_trans_reg
Other DBs
NCBI-GeneID: 17324262
NCBI-ProteinID: XP_005716555
UniProt: R7QGY8
LinkDB
AA seq 548 aa
MVEEDALAAAKAALLAEVAAPSSSARQKPRRRRRGRRRPRTHRLGAAADGAADDAGNVVE
YVGEDIEAVVGDAADAAGGLSQAEIDVMREVLRRFEGRGADPEEHEGEEGEQEGEGKQDV
DKDMNGDKRNAAVSGKQDEEEDDEADAEGDGEGNHGSTAMSRKQRKEHQRNLISHLKALS
AAPEVVEAWDITGPDPLLLVHLKALPNSVPVPSNWRQKRKYLQNKRGMEKRAFQLPAYIV
DTGVGELRHAQMEADESKSLKQRQREKMRAKTGRGVEIDHARLHDAFFKFQTKPRLTPHG
DVYYELRELEPDASKFRPGVLGEELRAALGMGEGDPPPWLVNMQRYGPPPGWRGLRVPGV
NCPIPSGARFGFQAGGWGKPPVDGRGRPLYGDVFDEGLEFGERDERFDLSEAAKAKLWGE
VEKVASEDGVRVVAEEEETEKEEEGEKRRDVESARVASEKGVEVPESGAAVVGDAPVRKG
IPAGQLYSVLEEQQVSVGETGMMGSSHVYRVNETGETGGGEDKGEKRKRDESAVEVKRTQ
KKAKEFKF
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggtggaggaagacgccctcgctgccgccaaggccgccctgctggcggaggtcgcagcg
ccttcatcgagcgcccgccagaagcccagacggcggcggaggggtcgtcggaggccgcgc
acccaccgcttgggtgccgccgctgacggtgcagcggatgacgcgggaaacgttgtagaa
tacgtaggagaagatatcgaagccgtcgtgggggacgcggcggatgcggccggcggcttg
tcacaggccgagatcgacgtgatgcgggaggtgctccgacgctttgaggggcgtggggcg
gatcccgaagagcatgagggggaagagggggagcaagaaggagaggggaagcaggatgtg
gataaggatatgaatggagacaagcgaaatgccgctgtcagtggaaagcaagatgaggag
gaggacgacgaggcagatgccgaaggggatggcgaggggaatcacggatctacggccatg
tcacgcaagcagcgcaaggagcaccagcgcaacctcatctcgcatctcaaggctctttcc
gccgccccggaggttgtggaggcctgggacatcacgggcccggacccgttgctgctagtg
catctcaaggcgcttcccaactcagttcctgtcccgtccaactggcgccagaagcgcaag
tacctgcagaacaagcgcggtatggaaaagcgcgcctttcagctccccgcctacattgtc
gacacaggcgtgggcgagctgcgccacgcccagatggaggccgacgagagcaagtccctc
aagcagcgccagcgcgagaagatgcgcgcaaagacggggcgcggcgtcgagatcgatcac
gccaggctccatgacgcctttttcaagtttcagacaaagccccgcctcaccccgcacggt
gatgtttactacgagctgcgtgaactcgagccagacgcatccaaatttaggccaggcgtg
cttggcgaggagctgcgagcggccctcggcatgggtgagggggatcctccgccgtggctg
gtcaatatgcagaggtacgggccgccccccgggtggaggggccttcgagtgccaggcgtt
aactgtcctattccgagcggggcgaggtttgggtttcaagccggggggtgggggaaaccg
cctgtggatgggcgggggaggccgctctatggggatgtcttcgatgaaggtttggagttt
ggggagagggatgagaggtttgatttgtcagaggcggcgaaagccaagttgtggggcgaa
gtggagaaagttgcgagcgaggacggggttcgtgttgtggcagaggaagaagagacagaa
aaggaagaagaaggggaaaagaggagggatgtggaaagcgccagagttgcatcagaaaag
ggagtggaagtgccggaaagtggagcggcagtagtaggagatgcaccagtgcggaaggga
attcccgctgggcagctatattctgttttggaagagcagcaggtttctgttggcgagaca
gggatgatgggttcatcgcatgtttaccgggtgaatgagactggtgagactggtggtgga
gaagacaaaggagaaaagcgaaagcgagacgagagtgcggtggaggtgaaacggacgcag
aagaaggcgaaagaattcaagttctag

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