KEGG   Chondrus crispus (carragheen): CHC_T00005348001
Entry
CHC_T00005348001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CHC_T00005348001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccp03021]
    CHC_T00005348001
Transcription machinery [BR:ccp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     CHC_T00005348001
 Prokaryotic type
  Archaeal type
    TFE
     CHC_T00005348001
SSDB
Motif
Pfam: TFIIE_alpha TFIIE-A_C
Other DBs
NCBI-GeneID: 17324760
NCBI-ProteinID: XP_005717045
UniProt: R7QIC0
LinkDB
AA seq 427 aa
MLVRSFYPSEFVVLLDAVLRHNNYCAHHDLSRRLKIQPKELRQILVRMVHARLMCNEKRQ
QKRINLKDERRATRLVNTEFWYVPLAQVVDAFQYRVHHLVTEIDQARANENAQQTVACDA
CRTAYELIEVIANDRTPDGNWVCDRMGVRRDRRKLPCGGVIREKDNSAQIKETERIKAKL
DDELRVLRERAAQCARMDIPEHPLEGADEATWGELVPETVGIHGEAVDEEGLSKEIAEKL
GESGKTAEPAGGLQGLAPAVEKKGDAAIPEKPMWFKDSNQEGDDDDDWVEDQAATQNMLD
SKTGTAASMVDDEKQYYEKYMQQIAGEPVPVAVAKPKEAGNVARPAEATILDSGEKGTEA
PTEAVPPVDDDEPEDVAVYVAGKKMMLSEVTDDMHDLMTSDEYNAYFALANGGGAGGDED
DDDAQFE
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgctcgtccgctccttctacccgtccgaattcgtcgtccttctagatgccgtcctgcgc
cacaacaactactgcgctcaccacgatctctcgcgccgccttaagatccagccgaaggag
ctgcgtcagatcctggtccgcatggtccacgcgcgcctgatgtgcaacgagaagcgccaa
cagaagcgcatcaacctcaaagacgagcgccgcgccacgcgcctagtcaacaccgagttc
tggtacgtccctctcgctcaggttgtggacgccttccagtaccgcgtgcaccacctcgtc
acggagatcgaccaggcacgcgccaacgagaacgcccagcagaccgtcgcgtgcgacgcg
tgccgcaccgcgtacgagctcatcgaagtcatcgccaacgaccgcacgccggacggaaat
tgggtctgcgaccgcatgggtgtgcgccgcgaccgccgcaagctcccgtgcggcggcgtc
atccgcgagaaggacaactcggctcagatcaaagagaccgagcgcatcaaggctaagctg
gacgacgagctgcgcgtgctgcgcgagcgtgccgcgcagtgcgcccgcatggacattcct
gaacatccgctggagggcgcagatgaggccacgtggggagagctcgtccctgagacggtc
ggcattcatggcgaggccgtcgacgaggagggcctgtccaaggagattgccgagaagctt
ggcgagtctggtaagacggccgagcccgctggagggctgcaaggccttgctcctgccgtc
gagaagaagggcgatgccgccattccggagaaaccgatgtggtttaaagattcaaaccag
gaaggcgacgatgatgacgattgggtggaggaccaggccgccacccagaatatgctcgac
tcgaagacaggcacagctgcgagcatggtagatgatgagaagcagtattatgaaaaatac
atgcaacaaattgcgggcgagccggtgccggtcgccgtcgccaagccgaaagaagccggc
aacgtggccaggccggccgaggctaccatccttgacagcggtgaaaaggggaccgaggcg
ccaaccgaggctgtgccgcccgttgacgatgatgagccggaggatgtcgctgtgtatgtc
gccgggaagaaaatgatgttgtcggaggttactgatgacatgcacgatctcatgacttcc
gacgagtacaatgcctactttgcgcttgcgaatggagggggggctggtggagacgaggat
gacgatgatgcccagtttgaatag

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