Chondrus crispus (carragheen): CHC_T00005348001
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Entry
CHC_T00005348001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHC_T00005348001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccp03021
]
CHC_T00005348001
Transcription machinery [BR:
ccp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
CHC_T00005348001
Prokaryotic type
Archaeal type
TFE
CHC_T00005348001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Motif
Other DBs
NCBI-GeneID:
17324760
NCBI-ProteinID:
XP_005717045
UniProt:
R7QIC0
LinkDB
All DBs
AA seq
427 aa
AA seq
DB search
MLVRSFYPSEFVVLLDAVLRHNNYCAHHDLSRRLKIQPKELRQILVRMVHARLMCNEKRQ
QKRINLKDERRATRLVNTEFWYVPLAQVVDAFQYRVHHLVTEIDQARANENAQQTVACDA
CRTAYELIEVIANDRTPDGNWVCDRMGVRRDRRKLPCGGVIREKDNSAQIKETERIKAKL
DDELRVLRERAAQCARMDIPEHPLEGADEATWGELVPETVGIHGEAVDEEGLSKEIAEKL
GESGKTAEPAGGLQGLAPAVEKKGDAAIPEKPMWFKDSNQEGDDDDDWVEDQAATQNMLD
SKTGTAASMVDDEKQYYEKYMQQIAGEPVPVAVAKPKEAGNVARPAEATILDSGEKGTEA
PTEAVPPVDDDEPEDVAVYVAGKKMMLSEVTDDMHDLMTSDEYNAYFALANGGGAGGDED
DDDAQFE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtccgctccttctacccgtccgaattcgtcgtccttctagatgccgtcctgcgc
cacaacaactactgcgctcaccacgatctctcgcgccgccttaagatccagccgaaggag
ctgcgtcagatcctggtccgcatggtccacgcgcgcctgatgtgcaacgagaagcgccaa
cagaagcgcatcaacctcaaagacgagcgccgcgccacgcgcctagtcaacaccgagttc
tggtacgtccctctcgctcaggttgtggacgccttccagtaccgcgtgcaccacctcgtc
acggagatcgaccaggcacgcgccaacgagaacgcccagcagaccgtcgcgtgcgacgcg
tgccgcaccgcgtacgagctcatcgaagtcatcgccaacgaccgcacgccggacggaaat
tgggtctgcgaccgcatgggtgtgcgccgcgaccgccgcaagctcccgtgcggcggcgtc
atccgcgagaaggacaactcggctcagatcaaagagaccgagcgcatcaaggctaagctg
gacgacgagctgcgcgtgctgcgcgagcgtgccgcgcagtgcgcccgcatggacattcct
gaacatccgctggagggcgcagatgaggccacgtggggagagctcgtccctgagacggtc
ggcattcatggcgaggccgtcgacgaggagggcctgtccaaggagattgccgagaagctt
ggcgagtctggtaagacggccgagcccgctggagggctgcaaggccttgctcctgccgtc
gagaagaagggcgatgccgccattccggagaaaccgatgtggtttaaagattcaaaccag
gaaggcgacgatgatgacgattgggtggaggaccaggccgccacccagaatatgctcgac
tcgaagacaggcacagctgcgagcatggtagatgatgagaagcagtattatgaaaaatac
atgcaacaaattgcgggcgagccggtgccggtcgccgtcgccaagccgaaagaagccggc
aacgtggccaggccggccgaggctaccatccttgacagcggtgaaaaggggaccgaggcg
ccaaccgaggctgtgccgcccgttgacgatgatgagccggaggatgtcgctgtgtatgtc
gccgggaagaaaatgatgttgtcggaggttactgatgacatgcacgatctcatgacttcc
gacgagtacaatgcctactttgcgcttgcgaatggagggggggctggtggagacgaggat
gacgatgatgcccagtttgaatag
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