Chondrus crispus (carragheen): CHC_T00005501001
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Entry
CHC_T00005501001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03420
Nucleotide excision repair
ccp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CHC_T00005501001
09124 Replication and repair
03420 Nucleotide excision repair
CHC_T00005501001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccp04121
]
CHC_T00005501001
03400 DNA repair and recombination proteins [BR:
ccp03400
]
CHC_T00005501001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccp04147
]
CHC_T00005501001
Ubiquitin system [BR:
ccp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
CHC_T00005501001
DNA repair and recombination proteins [BR:
ccp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
CHC_T00005501001
TCR (transcription coupled repair) factors
Cul4-CSA complex
CHC_T00005501001
Exosome [BR:
ccp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CHC_T00005501001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
17324893
NCBI-ProteinID:
XP_005717178
UniProt:
R7QH02
LinkDB
All DBs
AA seq
786 aa
AA seq
DB search
MTSPRRLAQSDSLPKPQAKRPRTLSIHSATLPPSARSHVAMDRRTPRSATAPTARRLVIR
PYKEPPKAPDDLFRTAWDTQLHPAVLAVYKSAPVPFSLEELYGKVKDACLHKHAPELYTE
LRAACDRQVARQIAQLCGGTVEVDAFLRAVDTVWRRYCTHMLRIRAIFLHLDRTYIIQGG
NPDAKSFWDMGLHIFRVHFSSAHAVQDRTVKSLLEIIDRDRDGESVDTSVLKSLLSMFTA
IGTYEKAFENPFLASTDQYYRKESEKLISESDIPTYLIHAERRMREESNRAISNFGARTC
APLIMTIEKRLVTDHVELILNKGFSAMCDEGRNDDIKRCYDVLSRANAHMPKDSLDAHEM
MKARVIAYVKGVGRFIVMDREKDSQMVQSLLDLKSRLDELVQYSFNGSDTFHNAVNLAFE
FFVNARENKPAELIAKFVDGILRTGNRGFSEEELETTLDKALTLFRFIDGKDIFEEFYKK
DLAKRLLYDKSASLDLEKSMISKLKAECGAQFTSKLEAMFRDVDASKDLMQSFKTHAASR
KRLGDSVELNVFVLEAARWPLSSQVTNVKLPQSLIGYQQTFKSFYLTKHSGRKLSWQHVD
GSCVVSAHFPKGRKILNLSLYQTIITVLFNDSDEISYQDIEQATGIPKQDLKRTLLSLAC
GRVRILQKRPKGRAVDSSDCFVFNKMFEHRSTRIKINAIQMKETVEQNAATTERVFQERN
CQIDAALVRIMKTRRTLHHTALIGEIYSQLRFPHKPADIKKRVESLIEREYLERDEKNAQ
TYHYLA
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgccacggcgtctcgcgcagtcggactcactgccgaagccacaagcgaagcgt
ccccgcacgctatccattcactctgccaccttgccgccctcagctcgttcacacgtcgct
atggaccgccgcaccccgcgttccgccaccgctccaacagctcgaaggcttgtaatccgc
ccgtacaaggagccacctaaggctcccgatgatctcttccgcaccgcttgggacacccag
cttcatcctgccgttcttgcagtctacaagtccgcaccggtgcctttttcgcttgaggag
ctctatggaaaggtcaaggatgcttgcttgcacaagcatgcacccgaattgtatactgaa
ctacgcgcagcatgcgatcgccaggttgccaggcaaatagcccagctatgtggcggcacc
gtcgaagtggatgcatttttgcgggctgttgataccgtttggcgccgctactgcactcac
atgcttcgcatccgcgccatcttcctccaccttgatcggacctacatcattcaaggagga
aaccctgatgccaaatccttttgggacatgggacttcacattttccgcgttcacttttcc
tcggcccatgctgtccaggacagaacagttaagagtttgttagaaatcatcgaccgtgat
cgtgacggcgagtccgttgacacgtccgtgttgaagagtttgctttccatgtttaccgct
attggcacatatgaaaaggcctttgagaacccgtttcttgcctccaccgaccaatattac
aggaaagagtcggagaaactcatttcagagtctgatattcctacctatctcattcatgca
gaacgccgtatgcgtgaagagtcaaaccgcgccataagcaattttggcgcacgtacatgt
gcccctctcatcatgactatagagaaaagacttgtcaccgatcatgttgaactaattctg
aacaagggatttagcgctatgtgtgacgaaggccgaaatgatgacatcaagcgttgctat
gacgtcctctctcgggcgaacgcgcacatgccaaaggactctctcgatgcacatgagatg
atgaaggcgagagttatcgcttacgttaaaggggttggtcgtttcattgtgatggaccgc
gaaaaggactcgcagatggtacaatctcttctcgatctcaaatcacgtctcgatgagctt
gtgcaatactcgttcaatgggtcagacactttccacaatgccgtcaacttggcctttgag
ttctttgtcaatgcgagagagaacaagcctgcggagctaatagccaaattcgtggacgga
attctccggaccggaaacaggggcttttccgaggaggagctcgagaccaccctggacaag
gcactgactcttttccgtttcattgatggcaaagatatctttgaagagttctacaaaaag
gacctggcaaagcggttactgtacgacaaatctgccagcttggatctggagaagagcatg
atatcaaaattgaaggcagaatgtggtgcgcagttcacttccaagctggaagccatgttc
agggatgtagatgctagcaaggaccttatgcagagcttcaagactcatgctgcgtccaga
aaacggcttggtgattctgttgaactaaacgtgtttgtgctagaggctgcaagatggcct
ttaagtagccaggtaacgaacgtcaagcttccgcagagcttgattggatatcaacaaact
tttaagagtttttacctcaccaagcatagcgggcgaaagctctcatggcagcacgtggac
ggttcctgtgtggtcagtgcacattttccgaaagggaggaagattttaaacctgtcgctg
taccaaacgataatcacggtgttattcaacgattctgatgagatttcataccaggacatt
gaacaagcaacaggtatccctaaacaagatcttaagcggactcttctgtcgcttgcatgc
ggaagagttcgaattcttcaaaaaagaccaaagggaagagcagtggatagcagcgattgt
tttgtttttaacaaaatgttcgaacacagatcgacacgaatcaagatcaacgcaatccaa
atgaaggagactgtagaacagaatgcggcaactacagagcgtgtattccaagaaagaaac
tgccagattgacgcggcgctcgttcgaatcatgaagaccaggaggactcttcaccacacg
gcgttaataggagagatctacagccagcttcgttttccgcacaaaccagccgacatcaag
aagcgagtagaatctctcatcgagcgcgaatacttggaacgcgacgaaaagaacgctcaa
acgtatcattacttagcgtaa
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integrated database retrieval system
