Chondrus crispus (carragheen): CHC_T00005546001 Help Entry CHC_T00005546001  CDS       T02916                                  Name (RefSeq) hypothetical protein Organism ccp  Chondrus crispus (carragheen) SSDB OrthologParalogGFIT Motif Pfam:  Uso1_p115_head Nuf2_DHR10-like Tropomyosin Uso1_p115_C Motif Other DBs NCBI-GeneID:  17324414 NCBI-ProteinID:  XP_005716706 UniProt:  R7QEE8 LinkDB All DBs AA seq 2520 aa AA seqDB search MNYLSGALRYVAGGESAPTVSIPRLVDRLTSASLPQDRRSALSALVLAASASPSRQALVA ELVVKPLYAVLEQDADYDDTVKAALDLLLALCGTLDPPTDPHALVAAMLDSLQGDSLPQN QLVTAFEQASARAAQTNVDMFLGLPAAVSLLLALLDKNDFYLRFTTIELLTAMAANSRPT LQAALLEAPQGVSRICDLLDDTHRLLRSNAVLLLSTLCNDSSEISKIVAYAGVLEKLFAL IESPTRNPLEPYPAEEDDDDDDDDNLEAAIVVQDVLYVLRNLIRGASTTRTMFRDSGSLT RLVNLIQRTALDASMPTSRQIAASASGRKIAVEKQARKNLIIAMQCIAGLAQDADSETRL VKNDLATTNLFNILAGLAFAPVTKLQPKEQDERLPEHVLNVRVGALKTLALLARGHDDFR SMFASVTFSVAAEGEATCAQKAALSAMFGDSSSAVRVASYAALRESLVMDAGLDLPSSSL LNAMTSAAVSTGLVLTDRSTALPRNQLSSNDLASSKNPLAAIAESLKVALVDWHNVTDAA GVFYAASLMMWILARIDGARERLLMAYVHGSSLLPQVIRVLGKLERENGSPEIRIALFSL ACTWLHGSAPAVSAFLSSAMHLPMLVDVLNGTGVRGDIAEVHTRGLSAVLLGICLQATDA TSDSGFISGSGGASMVIPRGTVADVIRNRIGVTVFTASLDDMRASKAYVSAKAGESLWAF AEKITVTEETTGYLSRAGNLGHDRWYGADVVGVVNDVYKNIGARALDLLSDQSPLQNGIG GTGASHLLSNGHVGNGQYEPHGQKAVLADSVRDEVLNSYKEFIRSQDESLNAARRQIEEL ATALRETQKELDVSINDASRGNDLDKNSSLQTANEELLAQKEALEALVEEKNRDFAALSD AYAALEEDSQAADNLNEASGSAAAEVSSLRSQNVAIRSSLNDEVAKTMELGHKATLLDSE LRAKCSELTATIQERDMLKANVQPDLSEALQWRTRADTAEAKLLSCQSVLDSVRTTKKIL ETQLADARRNEDAVASELSLERELEASRADLEELRSTRRRELQVARESSHVAAAAAQDEI AILKSQLTEARQAQPQAPVAGSVVVRGEEMQEYERMKSEHRSLVSTLEEVKTSLADTQGA VLLWQKRAEAEERAKMQEKAENSRLGSIAQELQKDVHALKSSAASESELASARVVELQQQ NAELNEMRRRADEEAKSLKEDVAARTEQSIRLSGQLYETEEAKEKVEQKLAELQQELSNA QRDHLQSEREVSTGGVARSNVEQTSGDLQLLVSALQEQLEATKDALIDSNDAKSLAEAKA REREAAVEKAASLEERLTKSQIIEEKLTADVDFLRERLLSLDEAEEAKRALTMQVVELQN SLAQVSPATSSLANAKLSDSEQRVKVLQNQVQEKELRLQGLESSLTAALDRADVSDRKIA DTEKQVAESETMVSVLSSEKDSLLSECDRLRRELDARAPVNDMDMSAVQNMEQKLQETES RRVATSKELASQIDACRGAEEEARRLRIENEDLRLVVSRLESELHAVQREKDTVFVGREV ENIVNSIVLNSLLSASSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXEREVALAASKTKVDRLTQQTENVTDLQETQRERDQLLRSLEDSKSFLSNLEKD NENLKGLLQEANALKPSNQIQPVSQEECRACAEAAREPGHSRVAELEGALRDAARTVSAT NLELIAAQALLVELSADKTAIRTELASAQEKIENLKSSLSVESRAPKNESLISEVSEPEQ TIVDDFVNGCPSCSDKEVTEESFRGAQANVENLRTILRRTASEADCAVSLLSTVELKFEQ IEREFHLSKSSLDDANALEKKLLSELADLKQSHEIETAQVRAEVDQLSQRLAALHIEKDE ASTKLSNQLKAVEASLSVKQEEFRAQLSDKEGMIEKLKQREESLTSQLHDVTENLMKLSE RAGALEEGNNKYRAATEALEDKLASEREALAESKRREKSLEVSLQQSKDDLQRERESFDG EVRRLKSASEREVEELKAEVERSNLALENAERTFRISETSLKTTLKTTRTELESALESKE KTIADLLSTSEMLEASSEEVKELKSLQLKAADETERVVAELRSQRDEALSDVHQLRAELE AKSRALASITLCVEKLERKQKDAQGQISMLEGENEDYLSSIQSLETKCKRFGDNLSRTEA KLSGATVRFEKCSAALDRQTKALEDTSTELKQSKEKCRSVEEQELKLTKQVDNLREELDR SVKAREAVERDNEDLKAWVADLERQATDLHRAAEDFSDVEESLRQTMDSLRQVAEQNAGL TEDLKKEREVVANLEAQLRGAVRERNAAEGARDASKRRTSNLESRLRKIREDHVNRVSNS EAGMRGMVERCVELETKLAAAERELAEVASVSDTLFGVQAELGQKEEDMKSVRERASVAE ERAEDLESKVQRLEAELAEGRENGSGEAYRVLEAEHNELLVCLAEMEYECTTLKEELGRD NT seq 7563 nt NT seq  +upstreamnt  +downstreamnt atgaactacctgtccggcgctcttcgctacgtcgcgggcggtgaatccgccccgaccgtc tccatcccccgtctcgtcgatcgcctcacctcggcctcgctcccgcaggaccggcgcagc gcgctgtccgccctggtgctggccgcgagcgcctcgccctcgcgccaggccctcgtcgcg gagctcgtcgtcaagccgctgtacgctgtcctcgagcaggatgcagactatgacgacacc gtcaaggccgccctggacctgctgctcgccctgtgcggcacgctcgacccgccgaccgac ccgcacgccctcgtcgccgccatgctcgactcgctgcagggcgactcgctcccgcagaac cagctcgtcaccgccttcgagcaggcaagcgctcgcgccgcccagacaaacgtcgacatg ttcctgggccttcccgctgccgtctccctcctcctcgccttgctcgacaagaacgacttt tatctccgctttaccaccatcgagctgctcacggctatggcggccaattcacgccccact ttgcaggccgccttgctcgaggcacctcagggcgtatctcgcatctgcgatcttctcgac gatacccaccgcctgctccgctccaacgctgtccttttgctctctacgctatgtaacgac tcttctgagatttcaaagatcgtcgcgtatgcgggcgtcctggagaagctcttcgcgctc atcgaaagcccgacccgcaaccctctcgagccttatcccgcggaagaggacgatgacgat gatgatgacgacaacttggaggcggccattgtcgtccaggacgtcttgtacgtgttgaga aacctcatccgcggcgcgagcaccactcgcaccatgtttcgagactcaggatctctcacg cgcctggtcaacctcatccagcgcaccgctctcgatgccagcatgcctacctctcggcag atagccgcatcggcgtcggggaggaaaatcgccgttgagaagcaggccagaaagaatctc attattgccatgcaatgcatcgcaggcctggcccaggatgcggacagcgagactcgatta gtcaagaacgacctggccaccactaacctatttaacatcctcgccggtttggcgtttgcg ccagtcacaaaactgcagccaaaggaacaggatgaacgacttccagagcatgtgttgaac gtcagagttggcgctctgaagacgttggcgttacttgcgagagggcatgacgactttcga tccatgtttgcgtctgtcactttttcggtcgccgctgagggggaggctacgtgcgctcag aaagctgctcttagcgccatgtttggggattcgtcgtctgcggtgagagttgcgtcatac gcagcccttcgagaatcgctggtgatggacgcgggtttggacctgccttcatccagtcta ctcaacgccatgaccagcgcggccgtatccacggggcttgttctaaccgatcggtccaca gctcttccccgcaaccagctctcttccaacgaccttgcatcttcaaagaatccacttgcc gccatcgctgagtccttgaaagttgctctcgtggattggcataatgttacggatgcagct ggtgtgttttacgctgcatccctcatgatgtggatactcgcacggattgatggcgctcgc gagcgcttactgatggcatatgttcatggcagctcgttgctaccgcaagtcatcagagtc ttgggcaagttggaaagagagaacggctcaccagagataagaattgctctcttttctctc gcatgtacatggctccacggatctgctcccgcagtttctgcctttctttcgtccgccatg catctaccaatgcttgttgatgtgctcaatggaactggagtacgtggagatatagccgaa gtccacacgcgtgggctgtccgctgtgttgctcggaatctgcttgcaggccactgatgca acaagtgacagtggtttcatttcgggaagcgggggtgcgtcaatggtcatccctcgtggg acagtggctgatgtcattcgcaaccgaataggcgtgacagtgttcacggcctctttagac gatatgcgagcatccaaggcatacgtgtcagcgaaagcgggagaatccttatgggccttt gcggagaagataactgtaacagaagaaaccacaggatatttatccagagcggggaatcta ggccatgacagatggtacggtgcagacgtagtcggtgttgtgaatgatgtctacaaaaat atcggtgcccgggctttagaccttctgtcggaccagtctccgttacaaaacggcataggg ggtaccggcgcatcacatcttttgagcaacggtcatgtgggcaatgggcaatacgaacca catggtcagaaagcagtcctagctgattcagttagagatgaggttctcaactcctacaag gaattcattcggtcacaagacgaaagtctcaacgcggcgcgtcggcaaattgaggagttg gcgaccgcgctgcgagagacccaaaaggagttggatgtcagcataaatgatgcttcgaga ggcaatgatcttgataaaaacagcagccttcaaacagcaaatgaagagcttctcgcacag aaagaagcattggaggctcttgttgaggaaaaaaacagggactttgcagctctctcagat gcctacgcggcgcttgaagaagacagccaggcggcagacaaccttaatgaggccagcggt tctgctgccgcagaagtgtccagtctaaggtctcaaaacgtagctattagatcttcattg aacgacgaagttgcgaagactatggagttgggtcacaaagcaacgctcctggatagcgag ctacgtgcaaaatgttcagaactaactgcaacaattcaagaacgtgacatgctcaaagcg aatgtgcagccagacttatcagaagcgctgcaatggcgcacgagggccgatacagcagag gcgaagttgttatcttgtcaatcagttcttgattcggtacgaacaacgaagaagatactg gagactcaactagcagacgcgagacggaatgaggatgccgtagcatcagagttgtcactt gaaagggaactggaagcttcacgggcggatcttgaagagctaaggtccacgagacgacgg gagttgcaagtggcacgagagtcctcccatgtggccgccgccgcagctcaagatgaaatt gctattttgaaaagtcaacttaccgaagctcgtcaggctcaacctcaggcccctgtagca ggcagcgtagtagtaaggggggaagaaatgcaagagtatgaacgtatgaagagtgagcat cgatcactggtgtcaacattggaggaggtgaaaacatccctagctgacactcaaggtgcc gtcttgctatggcaaaaacgagcagaggccgaggaacgcgcaaaaatgcaagaaaaggct gaaaactcgcgcttgggcagcatcgcccaggagcttcaaaaggacgtacacgcgttaaag tctagtgctgcgtccgagtctgaacttgcatccgcacgtgtcgttgaactgcaacagcaa aacgccgagctcaatgaaatgcggcgtcgtgcggacgaggaggcaaagagtctcaaggaa gacgtagctgctagaactgagcaaagtatccgactgtcagggcagctatacgaaacggaa gaggccaaagaaaaggttgaacaaaagctggcagaactccagcaagaactgtcaaacgca caaagggatcatttacaaagcgaacgtgaagtgagtacgggtggtgttgcccgtagtaac gtcgaacagacctcaggagatcttcagttgctggtatcggcgttgcaagagcaactcgaa gccaccaaagatgcccttatcgacagcaatgatgccaagagtcttgcggaggccaaggca agggagcgtgaagccgcagtagaaaaggcagcctctctcgaggaaagactgaccaagtcg caaataatagaggaaaaactcactgctgacgtcgactttctaagagaaaggcttctttcc ctagacgaagcagaggaagcgaaacgcgcgctgacgatgcaggtcgtcgagttgcaaaac tccttagctcaagtgtctcctgcaacttcgtctttggcgaacgcgaagctctcagacagt gaacagagggtcaaggtattgcaaaaccaagttcaggaaaaggagttgcgactccagggc ttggaatcctctctgactgcggcactcgatcgcgctgatgtatctgataggaaaattgcc gatactgagaagcaggttgccgagtctgaaacaatggtgtcagttctcagctcagagaaa gacagcctgttgtctgagtgcgatcgccttcggcgagagctagatgctagagcaccagtg aatgatatggacatgtctgctgtacaaaacatggaacagaagttgcaagagactgaaagt cgacgagtagcaacatcgaaggaactagcgtctcaaattgatgcgtgtcgtggagctgag gaggaagcacgaagactgcgcattgaaaatgaagatttacgtctggtagtttcacgtctc gagtcggaattgcacgccgtccaaagggaaaaggacacggttttcgttggccgagaagtt gagaacattgtcaattctatagtcttgaattccttgctgagcgcatcctcggagannnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnaagagcgcgaagtcgcgcttgcagccagcaagacgaaagtc gatcgacttactcaacaaaccgaaaatgttactgatttacaagagacccaacgggagcgg gaccagctcttacgttccctggaggattcgaagtcatttttgtcgaacctggagaaagac aacgagaatctgaagggacttctacaagaagcgaacgcattgaaaccatcaaaccagatt caacctgtgtctcaagaagagtgcagagcttgcgctgaagcggcaagagagccaggacat tcacgtgtagcagaattggaaggggcattgagagatgctgcgaggaccgtttcagcaact aatcttgaattaattgctgcccaagcactactggtagagctttccgcagacaaaacggcc attcgtactgagctcgcttccgcacaagaaaaaattgagaatctgaagtccagtctctcc gtcgaatcaagagctccaaagaacgaatccctgatatcggaagtatcagagcccgaacaa accattgttgatgactttgtgaatgggtgtccttcatgcagcgacaaggaagtcactgag gaaagctttcggggggctcaagcaaatgtcgaaaatctgaggacaattttgcggcggaca gcctcagaggctgactgtgctgtctcccttctcagtactgttgaactgaaatttgagcaa attgaacgtgaattccatttatcgaagtcatccctggatgatgccaacgcattagagaaa aagttactatcagaattggcggacttaaaacaatcgcatgaaattgaaacggcgcaggtt cgtgcagaagtggaccaattgtctcaaaggctggcagccctacatattgaaaaggatgag gcttcgacgaaactatcaaaccaattgaaagctgtagaagcatccctgtctgtgaagcaa gaagaattccgagcccaactttccgacaaggaggggatgatcgaaaagctaaagcaaaga gaagagtccctcacttcacagctgcatgatgtaacggagaacctaatgaagctttctgag agagccggtgcattagaagaaggcaacaacaaataccgcgcagcgactgaagctctagaa gacaagttggctagtgaaagagaggcccttgctgaaagcaagagaagggagaagtcgcta gaagtatctttacagcaatcaaaagacgatttgcaacgagagagagagtcttttgacgga gaagtacgaagactcaagtctgcatctgaaagggaagtagaagaactgaaggcagaggtt gaaaggtcaaatctagcactcgagaatgcagagcgcacgttccgcatctcagaaacgtca ttgaagacgactttgaagacgactagaacagaacttgaaagtgcccttgagtcaaaagag aagactatcgctgacttgctgtcgacgtcggagatgctagaggcttcatcagaggaagtg aaagagcttaaatctctgcaattgaaagcagcggacgaaacagagagggttgtggctgaa ctaagatctcaacgagatgaagccctctctgatgttcaccagctgagggcggaattagag gcgaaatctagggcactcgcaagtattacgttgtgcgttgaaaagctggagagaaagcaa aaagacgcacaggggcaaatctctatgctcgaaggtgaaaacgaagattacctatcatca attcagtcattggaaacgaagtgcaagcgatttggtgacaatctatcgcgaacggaagcc aagctgagcggtgcgactgtgcggtttgaaaaatgctcagctgcgcttgatcggcagacg aaggccctggaagacacgagcacagaactgaagcagagcaaggagaagtgccgaagcgta gaagaacaggagttgaagttgacaaagcaagtggataatctacgtgaagagctggataga tcggtgaaggcaagagaagcggttgagcgagacaacgaagatctgaaagcatgggttgct gatctagagcgacaagcgacagatcttcatcgggcagcggaagacttttcagatgttgag gaaagcctaaggcagacaatggattcgcttcggcaagtagcagagcagaacgcagggtta actgaggatctgaagaaggagcgggaagtggtggcgaatttagaagctcagttgcgaggc gcggtccgagagaggaatgcagcggaaggggctcgggatgcttcaaaacggcgaactagt aacctggagagcagattacgtaagattcgagaagaccatgttaaccgggtgagcaactcg gaggcgggaatgcgtggtatggttgagagatgtgttgaattggagacaaaacttgcagca gcggagcgagaattggcagaggtggcaagtgtttctgacacgctgttcggagtgcaagca gaactagggcagaaggaagaggacatgaagagcgtaagggaaagagcatcggtggcagaa gagagggcggaagacctcgaaagtaaggtgcaacgacttgaagcggaactggcagagggt cgtgaaaatggaagcggggaggcttaccgggttctcgaagctgagcacaacgaattgctg gtttgcttggcggagatggaatatgaatgcacaacgcttaaggaagagttgggacgggat tga

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