Chondrus crispus (carragheen): CHC_T00005598001
Help
Entry
CHC_T00005598001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03513
DNA polymerase mu [EC:
2.7.7.7
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CHC_T00005598001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccp03400
]
CHC_T00005598001
Enzymes [BR:
ccp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHC_T00005598001
DNA repair and recombination proteins [BR:
ccp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
CHC_T00005598001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
HHH_8
DNA_pol_B_palm
DNA_pol_lambd_f
P3A
Motif
Other DBs
NCBI-GeneID:
17324923
NCBI-ProteinID:
XP_005717179
UniProt:
R7QIV6
LinkDB
All DBs
AA seq
555 aa
AA seq
DB search
MGEGAGRPEKRRRTLPNVSLPISSQAQSGSNGYLACFDETKPIAVVVSPLKRRQGAILTR
NLRGAGACVIEDLSKLKEDAGGAEVASVVVVTDNKLRAEQQIGTLRSPRYVSTKWASAVL
SMRSPLPLDPYLLRDRPASVSDKINSGTTQDAKGHKSTGFLPVWCSLGRPDYSDIAQKQA
LLRNLPVHLCQRSTVTQSIYPSPNRDICKMLEKIAKKRVLEQAGGSTLAADTRAHAYQLA
SSALKCVPFALKTPQDVDSLHALGLRVLGAVREYLHTGDMHEASMLETDVRLRTLSEFRE
FYGVGAASARELYDVRGVTSVEQLREKVKSYPNEFPETLVKHLHHFDRLKRLNFKQAETF
NQKVKACLNEGGKNNLHLRVTLCGGFRRAELSGHDVDLLYCRRQERADNHDSVLASVARR
LSQCGLLVSVLSLTANEEGWHERRYHTSRVRGVYRYAHDILHGLAVFEGCVFRVDVVGVR
DAAEFPFATLAWSGSTVFQRDLRLYCEKKGWIFNQHGIFERDGGHRVKLTPGPKSEMDVF
EAMGLTYRPPFERSC
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaggtgcagggcgtcctgagaagcggaggcgaacccttccgaatgttagtctt
ccgatttcgtcacaggctcaaagcggatctaacggatacctggcttgctttgacgagacc
aaacctatcgctgtagttgtttcgcccctgaagagacgccaaggagcgatattgacgcgt
aacttaagaggcgcaggggcatgtgtgattgaggacttgagcaagttgaaggaggacgct
ggaggtgcagaagtagctagcgtcgtcgtggtgacagataacaagttgcgtgcagagcaa
caaataggcactctccgaagtccgcgatatgtctcgaccaaatgggcttcagcagttctt
tcgatgcgatcaccgcttccgcttgatccctacctcctcagagatcgccctgcctcggtg
tcagataagatcaactcgggcacgacccaagatgcgaagggacacaagagcacaggcttt
ctccccgtgtggtgcagtcttgggaggcctgactacagcgatatcgctcaaaagcaggcc
cttctacgaaacttacctgtacatctttgccaacggagcacagtgacgcagagcatctat
ccatcgccaaaccgggacatctgcaagatgttggagaagattgcaaaaaagcgtgttcta
gaacaagctggcgggtcaacccttgcagctgatacccgtgctcacgcttatcaactagct
agctcagccttaaagtgtgtgccctttgcattgaaaacgccgcaagacgtcgacagtttg
catgcgctcggtcttcgtgtccttggtgctgtgcgcgaatatctacatacgggcgatatg
catgaggcgtcaatgctggagacggacgtgcggctgcggacgctcagcgagtttcgggaa
ttctacggagtaggggcagcatcagcccgagagttgtacgacgtgagaggtgtaacgagc
gtagaacagttgcgagaaaaagtgaaatcgtacccaaacgagtttccggagacgctggtc
aagcatttacatcatttcgacagactcaagcgtttgaacttcaagcaagccgagacattc
aaccagaaagtgaaagcatgtctcaacgaaggcgggaagaacaacctgcatctccgagtg
acactctgcgggggtttccggcgggccgagctgtccgggcacgacgtggacctgttgtac
tgtcgtcggcaagagcgcgcggacaaccacgactcggtgctagcctcggtcgcgcggcgg
ctctcccagtgcggattgctagtgtccgtactgtcactgaccgcgaacgaagaagggtgg
cacgagcggcggtaccacacgagccgcgtgcgaggcgtgtaccggtacgcgcacgacatt
ctgcacgggctggccgtgttcgaagggtgtgtgttccgagtggatgtggtaggggtgcgg
gacgctgcggagttcccctttgccacgctggcgtggtccgggtcgacagtgttccagcgg
gatctgcggctgtactgcgagaagaaggggtggatctttaaccagcacgggattttcgaa
cgcgacggcgggcacagggtcaagctcacgcccgggccgaagagtgagatggacgtgttt
gaagccatgggcctgacgtatcgccccccgttcgagcgcagctgttaa
DBGET
integrated database retrieval system
