Chondrus crispus (carragheen): CHC_T00005606001
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Entry
CHC_T00005606001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K19998
sec1 family domain-containing protein 1
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00005606001
Membrane trafficking [BR:
ccp04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
CHC_T00005606001
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
CHC_T00005606001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
17324918
NCBI-ProteinID:
XP_005717189
UniProt:
R7QIW8
LinkDB
All DBs
AA seq
628 aa
AA seq
DB search
MATSASVFGLKNRQRAVFESVMSTSNSDKKVREWKVLVCDAAAQDSLSCLFQPTQLRRHG
VTLHTQIDNPRGPVPDVPALYVIAPTPENIAWLLKDLAPRNQLYNTATVCFTSFVTRPLL
MALAAQMTIPAPVTLVKDLYADFVSYEQNLFSLNIPNSYLAMKSAKSESAVKSFVDVVVS
RLLSVLLTLGAIPIIRAQRGGAAEAVASALDKKLRDNLKLFQRSSFASRALSFRRPLLLM
LDRDFDFNSMLHHTWTYQALVHDCLGLKLNNVFVNVSDSKPRNTTKRKQYTMNKELDTFW
AENAASPFPQVADAIEKALAKYREEVEEINRNAGGRNQSAKASVFETSGLAATIASLPEL
SRRKETIDVHTNIATALLENINQRSLDSFFELESQIMTNTHRPATALSAEDYKIPLDRLR
LFLIYYSVFGRQLPEKTVAEFRGILHNAGVDSSIIEYVGRMKGYRHDLMTAPVPRRTGTI
NTAKLKGIMTSVVSRGYRSFANVAQNAKNLVVEEKKTFAVSRTLEIFMSEQARSRHGTSA
NDILEGYLLFDPKAMRLTSKQKMERMVFSDAIVFTVGGGNYVEYENCVEIVESRSSAVSP
KNVLYGTTELLTSEEFLAQMASAENGSR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcagcctccgtcttcggcctcaaaaatcggcagcgggctgttttcgaatca
gttatgtccacttctaattcggataaaaaggtgagggagtggaaggttctcgtttgcgat
gccgcggcacaagactctctctcctgcctgttccagcccacacagctgcgtcgacatggt
gttactttgcacactcagattgacaacccgcgcggcccagttcccgatgtaccggctctt
tatgtaattgcgcccaccccagagaacatagcctggctcctcaaagatctcgctccaaga
aaccagctctataataccgcgacggtttgctttacttcgtttgtcacgaggcccctatta
atggcccttgcagcacaaatgaccatcccggctcccgttacccttgttaaggacctctac
gctgactttgtcagctatgaacaaaacctattctcgctcaacatacccaactcatacctt
gccatgaagagcgcaaaaagcgaaagcgctgtgaagtcttttgtggatgtcgttgtctca
aggttgctatccgtgttacttacgctgggcgccatcccgattattcgcgcccagcgcggt
ggtgcggcagaagctgtcgcttccgcacttgataagaagttgcgtgataatttgaaactg
tttcagaggtcctcgtttgcaagccgagcgctttctttcagacgccctttgcttctcatg
ctggaccgtgactttgattttaattccatgttacatcacacatggacctatcaagctctt
gtccatgactgtcttggattgaagttgaacaatgtgttcgtgaatgtaagtgacagcaag
ccaaggaacactacaaagcggaagcagtacactatgaacaaggagctcgacacattctgg
gcagagaatgccgcgtctccgtttccgcaggtcgcagatgccatcgaaaaggctcttgcc
aaatatcgagaggaggtggaggagatcaacaggaatgctgggggtaggaatcaatccgcc
aaagcctctgtcttcgaaacgtcaggattggcagcaaccattgcctcgttacctgaattg
tctcgacggaaagaaacaatcgacgtacacactaacatcgccacagctctacttgaaaat
atcaaccaaagaagtctggacagtttttttgagctggaatctcaaatcatgaccaacacc
catcgcccggcaacggctctttcggcagaggactacaaaattccgctcgaccgcctacgt
cttttcctcatatactacagtgttttcggaaggcaattgcctgaaaagacggtggcagag
tttcgaggtatattgcacaatgctggggtcgactcctctattatagagtatgttgggcga
atgaaggggtatcggcacgacttgatgaccgccccagttcctcgccgcacaggtacgata
aacacggcgaagttgaagggaatcatgacaagcgttgttagtcgaggctacaggagcttt
gcgaatgtcgctcaaaatgcaaagaatctcgttgtggaggagaagaaaacttttgcagtt
tcgcgaacccttgaaatatttatgagcgaacaagcacggtcaaggcacggcacctctgcg
aatgacattcttgaaggatatctcctgtttgatcccaaggcaatgaggctcacttccaag
cagaaaatggagcgcatggtgttttcagatgcgattgttttcacggttggtgggggcaat
tacgttgagtacgaaaattgcgtggagattgtggaatccaggtcctcggcagtaagccca
aagaatgttctgtacggcaccaccgaactactaacttcagaagagttcctcgcgcaaatg
gccagtgctgaaaacgggtcacgataa
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