Chondrus crispus (carragheen): CHC_T00005625001
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Entry
CHC_T00005625001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
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NCBI-GeneID:
17324939
NCBI-ProteinID:
XP_005717216
UniProt:
R7QFU8
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AA seq
1774 aa
AA seq
DB search
MWHVDGKYYAGVIKDVLRVGKRLFHDVSYDKGDLEFFLDLKVRKWRYQNPDSEGDGEEES
ESATASKRTKSTSKGKKTSSRRTSRQRPASDEVLSGGSPSPLLRRVGRGDAPLFGGSTQK
ARGKPRKSLPPRFADDPRARESSFSPPLSPLGVPSLDTPPSLESPVLPILSRSPSVGRGD
GMGSGTGRLPDPGDFDKDILNLIVDEVDVPLPDLFELPRKRSRGQDIDAITANLVERKKQ
KAAELPGVEMDLIQTPPGKRSSSSIAKEDGDAIAPGDSGTGKLHSTELEDTEVINLQSPD
EQKRMAGEDGNRPDTDADRSPKSKEDSRPPETRQLAVRQPGGVVPVSGPAPDGRRLAVRK
PDTRQLAVRQPETRQLAVRRPEDRVLAVRQQPSRQLAVRNDSAPSNMVDSRHSAGSLTRE
VPVSRRRSLDVEYIDDRRRPKTRVSDIVSVAGLVARKWASEEVAVLMRRIQTSRKQVHNI
RKYQAAAEKTLRKRVKQIERIEQEEEERTRDLPKTAQNADAYLDLEAHLGSFKEDLVDQV
KRYRRTVEERERSLKRQFAVIKDEMAVQNTELLETAKTIRALDHDAIPALSRLEPRLKKV
VPESARSEVLSSPSGLMRTFPTIGYMESEAARGLQQKVSDLSRKSDLLSAEVKRLQEREK
QLSNEKERALVELTKSRYGMSGVASPPRKPVPTAPRRDVGITPSAPVSKGSRTLRTPARP
VRPAPVKPLGLVKKRVGVPKGGVSKDGLRHSGKANRKTLPRTSGKYKPPPPLPATPLVPK
TPTRAAPVAKGQVVVPSPSAPIPVKVFPAQLGKQMDKQAAELLALITTVWLLQDEGRSEP
PRKPGEKQDQWVEGCVKGALRHAVTYLTTCSGIMSAKKTLLQEVDGEAVKTTWISAENDA
GIEAARTNYKLWEPTLAQEEWIVEKRVLCGLNVSIRTAMKATAAAQFSATIMYAKEIGRR
ALVDFDVVMGPSLHRKVGDTGNVASLAGAQTQPASDMAAALNPMSSLTYTPVRTTDRTST
PDSSTKATATRGSAPGSQATAPIPRLPESARRTKGKAPNPVVPTATPILPAPTQVPRPQS
AAGAKASLPSKPPTTSPSQLTSTTPAAGGRTIVPKTSPAQNQGAAVPAGPSAMKAEKITS
QSKAADAPTPDKMKGVQTATAGVPSPEKAAVGAGASINARKSATDDAAGVQRGQVQSASS
AGKGASAGAALEAVKGTDLVSDASGSASRPAPNAVAKTSAPAGQVQPEKPKGPTGSDSRG
STILPAAPSSEMVPIPAQKPDVIEKTLVKPATEGSGAPGKKKASSQSGGQAGTKKSGGTA
KSRSAGSRKSTKAGSASKAQPSSLKAAAGRDQATQQPAVASAVLGQQGSAEELPNTGSNR
VYKARGKLSAQVTTSQIKAPPGTAQMRLPPVPTRRTAPSMRQDISVGAGDHSDPLLPGGG
MSASGVPGVQGMDASDGSSLKARDVGIPRVGGKMPSAKPPKQGSGQKEGRASGNDRGATL
LRGTPSSAAKGRKGSQNTLFQSTPRKQVGFKSIPQPGKRRSGLSNPSSPFDARVQAAYTP
SFDSVPASQVTQPSQHQEEYRRPATSQELHTALGTGGAHEAYRERVDGGSGGMFPSGEGA
YGTYGAAMHERGNELGHMDLMNPATPSAFPGLDGYMMNDSAVGLKRLPNEERESLPATPS
DFPPDRVFPGALNSPINFERNYVTPENFGASRNPYGAGASFGPGGGGPGGGGPGGGGASG
LGHLMNPQQQQQQGQAYRGQQFQHRAPFQRGGPR
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgtggcacgtggatggcaagtactatgctggtgtcatcaaggatgtcctgcgcgtgggt
aaacgcctctttcatgatgtcagctacgacaagggcgacctcgaattctttctcgacctc
aaggtacgaaagtggcgctatcagaatcctgacagtgaaggggatggtgaggaagaaagt
gaaagtgccactgcctctaagcgcacaaaatccacgtctaaggggaagaaaacgtcttct
cgacgcacgtcgcgacaacgcccggcatcagatgaagtcttgtctggcggcagcccaagc
ccgctcctaaggcgtgtcggacgcggcgatgcgcccctgtttggtgggtcgacacaaaag
gctcgcggaaaacctagaaagagccttcccccccgctttgcagatgacccaagagcccgg
gaatcgagcttctctcccccgctttcgccgctcggggtaccctcgctcgacacccctcca
tcccttgaatcacctgtgctgccgattctctcccgctccccgtcagtaggaagaggggat
ggaatgggttcaggcacagggcgactgccagatccgggagatttcgacaaggatatcctc
aatttgatcgtcgacgaagtggatgtgccgctcccagatctattcgaactgccgcggaaa
cggtcccggggccaggacattgacgcgattacagccaacctcgttgagcgtaagaagcag
aaggccgcagaattgcctggagtagagatggatttgattcaaacacctcctggaaagcga
tcttccagttcaatcgcaaaggaagatggagacgcgatcgctccgggcgactcgggtact
gggaaactgcattccacggagttggaagacacggaggtcatcaaccttcagtctcccgat
gaacaaaaacgcatggctggtgaagacggcaatcgtccagacacggatgcggatcgctcg
ccaaaatccaaggaggattctcgtccaccagaaactcgtcagttggctgttcggcaacct
gggggtgttgtgccggtttctgggccggcaccagatggtcgtcggcttgctgtccgaaaa
ccagatacgagacaacttgcggtgagacagccggagacgcgccaactggccgtgcgacgg
ccggaggaccgagtcctggctgtcaggcaacaaccttcacgacagctggcggttcgcaac
gactctgcaccttctaacatggttgattctcgccattctgctgggtcccttacccgggag
gtgccagtctctcggcgcagatcgctcgacgtggagtacattgatgacagacgaaggcca
aagacccgtgtgtccgacatcgtgtctgtggcaggtctggttgccagaaagtgggcaagt
gaggaggttgcagttctcatgcgaagaattcagacgtcacgcaagcaagtgcataatata
cgaaagtatcaggccgccgccgagaagactttacgtaaacgtgtgaagcagattgagcga
atagagcaagaagaagaggagcgcacgcgcgacctccccaagactgcccaaaatgcagat
gcatatctcgatcttgaggctcatcttgggagcttcaaggaagacctggtcgatcaagtc
aagcgatatcgccgtactgtagaagaacgggagagaagtctgaagcgtcaattcgccgtt
atcaaggatgaaatggcagtgcagaacactgagttgttggaaactgcgaagacgatccga
gcactagaccacgatgcgattccggccctttcacgtttagaaccgaggctgaagaaggtt
gtgcccgagtctgcacgctccgaggtattgtcgtcgccctcaggcctgatgcgaaccttt
ccgactattggatacatggaaagcgaagcagctcgtggtttacaacagaaagtttctgat
ctttctcggaaatcagacttattatcagcagaagtgaagcggttgcaagaacgcgaaaag
cagctgtcgaacgaaaaggaacgggcgcttgtcgagttgacaaagtctcgctatggtatg
agcggggtggcgtcgccccctagaaaacctgtgcccactgcgcctcgccgggacgtcgga
ataactccctctgcaccagtatcaaaaggaagcagaaccctcaggacacctgcccgccca
gtaagacccgcgcctgtcaagcctcttggattagtcaagaagagggtaggggttccgaaa
ggaggggtaagtaaagacggcctgcgacatagtggcaaagcaaatcgaaaaacgcttcct
cgcacctccggcaaatacaagcctccaccgccattgccggccactccccttgttccgaag
acaccgactcgagctgcacctgtggcgaagggccaagtggtcgtcccgtcgccttctgca
ccgatacccgtcaaggtatttccagcgcagctgggtaagcagatggataagcaggcagcg
gaacttctcgctctcatcaccacagtttggctgctacaggacgagggacgcagtgaaccc
cctagaaagcctggtgaaaagcaagaccaatgggttgagggctgtgtgaaaggtgctcta
cgacatgcggtcacatacctcacgacatgttctggtattatgagcgcgaagaagactctt
ctccaagaagtggatggggaagcagttaagacgacatggatttcagcagaaaacgatgca
ggaatagaagcggcccgcaccaactacaagctctgggaaccgacgttggcgcaagaagag
tggatcgtcgaaaagagagtgttgtgcggactaaatgtgtcaatcaggactgcaatgaag
gcaacagctgctgcacaattttccgccaccatcatgtatgcaaaagaaattgggcgaaga
gctctggtagactttgacgttgtgatgggacccagtttacatcgcaaggttggggatacg
ggaaatgtggctagtctagcaggagcacagacccaaccagcatccgacatggccgcggct
ctgaaccctatgagcagcctgacatacactcctgtgcgaacaacggatcggacttccacg
ccagattcgtctaccaaggcaactgctacacgaggctcggcaccgggatcacaagcgaca
gctccaataccaaggctgccggaaagtgcgaggagaacaaaaggtaaggctccaaacccg
gtagttcctactgccacacctattttgccagcaccaacacaagtgccgcgtccacaatcg
gcggcaggtgcaaaggcgtctctgccgtcaaagccgccgacaactagtccgagccaactc
acctctaccaccccggcagcaggtgggagaaccattgtaccgaaaacctcaccagctcaa
aatcagggagcggcggttcctgctggcccgtctgcaatgaaggctgagaaaataacttct
cagtcaaaggcagccgacgcaccaacaccggataagatgaagggagtacagactgcgacg
gcaggtgtgccttcgccagaaaaggcagctgtcggagctggtgcaagcatcaatgctcga
aaaagtgcaactgatgacgctgccggagtgcaacgtgggcaagtgcaatctgcatcgtct
gctggtaaaggcgcttcagcaggcgcagcactagaagcagtgaaaggcacagatttggtg
agcgacgcaagcgggtctgcttctaggccagcgccgaatgccgttgcaaagacgtcggcg
ccagctggtcaggttcagcctgaaaagccaaaggggcccaccggtagcgatagccgtggc
tctacgattctgcctgcagccccttcctccgaaatggtaccgatccctgcgcagaaaccc
gatgtcattgaaaaaacgcttgtcaagcccgccactgagggttccggtgcacctggaaaa
aaaaaagctagttcgcaatcaggtggtcaagcgggcacgaagaagtcgggcggcaccgcc
aagtcgcgcagtgctgggtctcgaaagagtacgaaagctggtagcgcatccaaggcacag
ccgtcatctttgaaagccgccgcgggacgcgaccaggctactcagcagccagcagtggcc
tctgcggttctaggacaacaggggagtgcagaagagttgccgaacaccggatctaatcga
gtgtacaaggcaaggggcaaactgagcgcacaagtcacaacaagtcagataaaagcacca
ccagggacggcacagatgcgactaccgcctgtaccaacacggagaacggcacccagcatg
agacaggatatttcggttggcgcgggtgaccattcggacccgctgctacctgggggcgga
atgagtgcgagtggcgtgcctggcgtgcaaggaatggacgcttctgatggatcgtcgctc
aaggcgcgagatgttggcatccctcgggtaggtggtaagatgccttccgcaaaaccgccg
aagcaaggatccgggcaaaaggaagggcgtgcgagcggcaacgaccggggggctacacta
ctgcgaggcacaccgagctctgctgccaagggccgcaagggcagccagaacacgctgttc
cagtcgaccccccgcaagcaagtaggcttcaaaagtattccgcagcctggtaaacggcgg
tcgggactgagcaacccctcgtccccgtttgacgcacgagtacaggccgcgtacacgccc
tccttcgactctgtcccggcgtctcaagtaacgcaaccgtcgcagcatcaagaggagtac
cgacggcccgccacctcgcaagagctgcacacggcgctcggcacgggcggggcgcacgaa
gcttatcgtgaacgcgtagacggcgggtcggggggcatgtttccctccggcgagggcgcc
tacgggacatacggcgcggccatgcacgagcgcgggaacgaactcgggcacatggacctg
atgaacccggccacgccgtcggccttcccgggtctggatgggtacatgatgaacgactcg
gcggtaggtctcaagcgtctcccaaatgaggaacgcgagtcgctgccggcgacaccgagc
gactttccgcccgaccgggtgttcccgggggcgctgaattctccgatcaactttgagcga
aactacgtgacgccggaaaactttggggcgtcgcggaatccctacggcgcgggcgcgagc
tttgggcctgggggtggggggcctgggggtggggggcctgggggtgggggcgcttccggg
ctcgggcacttgatgaacccgcaacaacagcaacagcaaggccaagcctaccgcggacag
cagttccagcaccgggctccgttccagcggggagggccgagatag
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