Chondrus crispus (carragheen): CHC_T00005746001
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Entry
CHC_T00005746001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccp03032
]
CHC_T00005746001
03029 Mitochondrial biogenesis [BR:
ccp03029
]
CHC_T00005746001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CHC_T00005746001
DNA replication proteins [BR:
ccp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CHC_T00005746001
Mitochondrial biogenesis [BR:
ccp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
CHC_T00005746001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Herpes_Helicase
Pif1_2B_dom
AAA_5
DEAD
AAA_16
AAA_22
UvrD_C_2
NTPase_1
AAA_11
AAA_29
AAA_7
NPHP3_N
DAP3
MeaB
AAA
Motif
Other DBs
NCBI-GeneID:
17325123
NCBI-ProteinID:
XP_005717394
UniProt:
R7QIG2
LinkDB
All DBs
AA seq
758 aa
AA seq
DB search
MVDSGDIKDEDFLQLLDSDQLLYSLATQPQPIPPNSAIHSPSQQTSEGDGPSKTEQSTVK
KEAKMDLALVKIEQQADQQQPTHVSGAAISVASESSVNPAAVLAPQAMLDARQRRRNITA
EINKALEQWRPTLKQPFGEKPPCTVNTINENSFPKPKRRKPNFTQSVPAANLENFQSSRS
RQHEQNTPSTVKEELQDQIKDQTQQSQKNAETKQKDLSKEEEHNEDEVDHFVADRYQAEA
IRAAKQGESFLLTGSAGTGKSFVLKHVISVLRSMGKVVGVTASTGCAAVGIGGGTIHSLS
GVGIGMDPIEKLVRKGHTDRVLRKRLKQLDVLVIDEISMIDSFLFDKLNAIIAAARCPPP
KRDSGITRGIRTLNSGPGGLFTLKPFGGLQVILCGDFFQLPPVAASDTRFVNSSEKFFAF
EAKTWKRIIKNTYVLRVVHRQADRQFAGLLNEVRQGVVSESTMQVLNACLVNPLKPLVEV
EENGRRVAFTKLFSYRRQVASENSSQLKKLKTKGIRYDAYDQIHRSELGTLTARHVQQML
DNTNCAQSIELRRGCRVLCTKNLDTGLGIVNGAPGIVVGWSRPLIEVYQKRKVEDPKLRF
DRFGPQDLKDTEIFELDNPGISQALETQARSQDDCPVMSGRMLGEVLPVVLLDNGQRCLM
EPVDWEVHGTKGQVVGFRRQVPLILGWALSIHKAQGMTLRDVETDVGGAFDYGQVYVALS
RATAVKKLRLRSFNPRKIVTHPKVTEFYAALDRTSSPR
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacagcggagacattaaagatgaggacttcttgcaactgctcgacagcgatcaa
ctcctctacagcctcgccactcaacctcaacccattccgccaaactctgcaattcattcg
ccctctcagcaaacgtcagagggtgacggtccgtctaaaacagaacaatccactgtgaaa
aaagaagcaaaaatggacttagctcttgtcaagatcgaacaacaggccgatcaacagcag
cctacgcatgtctctggcgctgcgatatctgttgcatcggaatcttcagtcaatcctgcg
gcagtcctagcccctcaggcaatgctcgatgcgcgccagcgtcgccgcaatatcacagct
gaaattaacaaggctttggagcaatggaggccaacactcaaacaaccgttcggggaaaag
ccgccatgcacagtgaataccatcaacgaaaattcctttccaaagcccaaacggagaaaa
cccaactttacacaatccgtcccagctgcaaaccttgaaaattttcaatcaagtcgtagt
cgtcaacatgaacagaacaccccctcaaccgtgaaagaagaactacaagatcaaatcaaa
gaccagactcaacagtcacagaaaaatgcggaaaccaaacaaaaggacctaagcaaagaa
gaggaacacaacgaggacgaggtagaccatttcgttgcggaccggtatcaagcagaagca
attcgggccgcaaaacaaggcgaaagcttcctgttaacgggtagtgcaggaacaggcaag
tctttcgttttaaagcacgttataagcgtgcttagaagcatgggtaaggtggttggtgtc
acagcgagtacaggctgtgcagcagttggaattggtgggggcaccattcattcattgagt
ggtgtgggtattgggatggacccaattgagaaattggtgcgcaaggggcatactgatcgt
gttttgcgaaagaggttgaaacaattggacgtgttggtcatcgatgagatatctatgatt
gatagcttcctgtttgataagttaaatgcaattattgctgcggcgaggtgtccaccgcca
aaaagggactccggaatcacaagaggaatcaggacactcaacagcggtcccggtggactg
ttcactctcaagccgtttggtggattgcaagtcattctatgtggtgatttttttcagctc
cctccagttgctgcgtccgatacacgcttcgtgaatagctctgaaaagttttttgcgttt
gaggcaaaaacgtggaagaggatcatcaagaatacttatgtcctacgagttgttcatcgt
caggcagatcgacagtttgccgggttactcaacgaagtacgccagggtgtggtttcagag
tcaaccatgcaggttctcaatgcctgccttgtgaatcctctcaagccgctcgtcgaggtg
gaagaaaatgggaggcgcgtggcattcacaaaactgttttcatacagacggcaagtagcg
agtgaaaattcatcgcagctgaaaaagctgaagacaaaaggaattcgttatgacgcgtat
gatcaaattcatcgatcggagttaggaacactgacagctcgtcatgtccaacaaatgtta
gataacacaaactgcgcccaatctattgagttgcgacgtggatgtcgcgtgctttgcacg
aaaaacctagacacagggcttggtattgtcaacggcgccccgggaattgttgtaggttgg
tcccgaccactcatagaggtttaccagaagcgtaaggtcgaagatcctaaactcaggttc
gatcgcttcggaccgcaagacctcaaagacacggaaatcttcgagttggacaaccctgga
atcagccaagctctggaaactcaagcccgaagtcaggacgactgtccggtcatgtctggt
cgtatgctgggcgaggtgcttccagtagttttgcttgataacgggcaacgatgtctgatg
gaaccggtagactgggaagtgcatgggacaaaaggacaggtggtcggcttccgcagacaa
gttccattaattctcggatgggctctctccatacataaagcgcagggcatgactcttcgc
gatgttgagactgacgtcggaggcgctttcgattatggtcaagtgtatgtcgcactctcg
cgtgccacagctgttaaaaagctgcgattgcggagctttaatccaagaaagattgtcacg
catccgaaagtcactgaattctacgcagcgttggataggacgtcgtcacctagataa
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