Chondrus crispus (carragheen): CHC_T00005853001
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Entry
CHC_T00005853001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K12184
ESCRT-I complex subunit VPS28
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CHC_T00005853001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00005853001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccp04147
]
CHC_T00005853001
Membrane trafficking [BR:
ccp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
CHC_T00005853001
Exosome [BR:
ccp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CHC_T00005853001
Exosomal proteins of other body fluids (saliva and urine)
CHC_T00005853001
Exosomal proteins of colorectal cancer cells
CHC_T00005853001
Exosomal proteins of bladder cancer cells
CHC_T00005853001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
17325208
NCBI-ProteinID:
XP_005717490
UniProt:
R7QHR5
LinkDB
All DBs
AA seq
240 aa
AA seq
DB search
MPAAPASPYVPPAPVTAAAPSAPVSVFSSAPPRGEPVRLYRDKRDEERNTDKYEDMSAVF
SVITATERLENIWARWGAISQDDYERQCELLIQQYKVLTASTAEFIPKIDKFIHEYDIKA
SKARPRLACGYPVTVKGPKEPKHQNKFVFRCTSLFHHLGTCIDTNQVAVGFLLPDLISLM
KTLKSISSLPQDFVFNARVEFWVEKLNAMPASFELTFDDASQLKLDLDNGYAELEAAISN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgcgcccgcgtcgccgtacgtgcctccggcgccggtcactgcggcggccccg
tcggccccggtgtcagtcttctcgtcggcgccgccacgcggagagccggtgcgcctgtac
cgggataagcgcgacgaggaacgcaacacagacaagtacgaggacatgtcggccgtcttc
tccgtcatcacggccaccgagcgcttggagaacatctgggcgcggtggggcgccattagc
caggatgactatgagcgccagtgcgagctgctcatccagcagtacaaggtgcttacggcg
agcacggctgagtttatacccaagattgataagttcattcatgagtacgatatcaaggcg
agcaaggcccgcccgagactcgcgtgtgggtaccctgttactgttaagggcccaaaggag
cccaagcatcaaaacaagtttgtcttccgctgcaccagcttgtttcatcatttgggtacc
tgcattgataccaatcaagtggcagttggctttttgctcccggatcttatctcgctcatg
aagacgttgaagagcatttcctccctgccgcaggactttgtgtttaatgctcgcgtcgag
ttttgggtcgaaaagcttaatgccatgccggcctccttcgagcttacgtttgatgacgct
agtcaactcaagctcgacctggacaacggctacgcagaactagaagccgccattagcaac
tag
DBGET
integrated database retrieval system