KEGG   Chondrus crispus (carragheen): CHC_T00005853001
Entry
CHC_T00005853001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CHC_T00005853001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccp04131]
    CHC_T00005853001
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccp04147]
    CHC_T00005853001
Membrane trafficking [BR:ccp04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    CHC_T00005853001
Exosome [BR:ccp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CHC_T00005853001
  Exosomal proteins of other body fluids (saliva and urine)
   CHC_T00005853001
  Exosomal proteins of colorectal cancer cells
   CHC_T00005853001
  Exosomal proteins of bladder cancer cells
   CHC_T00005853001
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 17325208
NCBI-ProteinID: XP_005717490
UniProt: R7QHR5
LinkDB
AA seq 240 aa
MPAAPASPYVPPAPVTAAAPSAPVSVFSSAPPRGEPVRLYRDKRDEERNTDKYEDMSAVF
SVITATERLENIWARWGAISQDDYERQCELLIQQYKVLTASTAEFIPKIDKFIHEYDIKA
SKARPRLACGYPVTVKGPKEPKHQNKFVFRCTSLFHHLGTCIDTNQVAVGFLLPDLISLM
KTLKSISSLPQDFVFNARVEFWVEKLNAMPASFELTFDDASQLKLDLDNGYAELEAAISN
NT seq 723 nt   +upstreamnt  +downstreamnt
atgcccgccgcgcccgcgtcgccgtacgtgcctccggcgccggtcactgcggcggccccg
tcggccccggtgtcagtcttctcgtcggcgccgccacgcggagagccggtgcgcctgtac
cgggataagcgcgacgaggaacgcaacacagacaagtacgaggacatgtcggccgtcttc
tccgtcatcacggccaccgagcgcttggagaacatctgggcgcggtggggcgccattagc
caggatgactatgagcgccagtgcgagctgctcatccagcagtacaaggtgcttacggcg
agcacggctgagtttatacccaagattgataagttcattcatgagtacgatatcaaggcg
agcaaggcccgcccgagactcgcgtgtgggtaccctgttactgttaagggcccaaaggag
cccaagcatcaaaacaagtttgtcttccgctgcaccagcttgtttcatcatttgggtacc
tgcattgataccaatcaagtggcagttggctttttgctcccggatcttatctcgctcatg
aagacgttgaagagcatttcctccctgccgcaggactttgtgtttaatgctcgcgtcgag
ttttgggtcgaaaagcttaatgccatgccggcctccttcgagcttacgtttgatgacgct
agtcaactcaagctcgacctggacaacggctacgcagaactagaagccgccattagcaac
tag

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