Chondrus crispus (carragheen): CHC_T00005968001
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Entry
CHC_T00005968001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03082
ATP-dependent chromatin remodeling
ccp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CHC_T00005968001
03083 Polycomb repressive complex
CHC_T00005968001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00005968001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CHC_T00005968001
Histone modification proteins
HAT complexes
HATB complex
CHC_T00005968001
HDAC complexes
Sin3A-HDAC complex
CHC_T00005968001
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CHC_T00005968001
PRC2.2
CHC_T00005968001
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CHC_T00005968001
Heterochromatin formation proteins
Other heterochromatin formation proteins
CHC_T00005968001
Chromatin remodeling factors
NuRD complex
CHC_T00005968001
NuRF complex
CHC_T00005968001
NuRF complex (fruit fly)
CHC_T00005968001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EML
WD40_WDHD1_1st
CAF1C_H4-bd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
17325555
NCBI-ProteinID:
XP_005717839
UniProt:
R7QKR8
LinkDB
All DBs
AA seq
476 aa
AA seq
DB search
MPTPVQPVGSLNADARFEIWKDQHVPLLYDWLSSRNLVWPHEALRWGALSPDENRSRERT
VISNGAPSITRALYLAERTGPSKNDPNTLLHFDVKVTPELSCKPQDIAKPWLNEAVVLER
ADQMSTRSFWLRKRIIHPGEVNRIRLAAPGVVITHTDNPHLFVWDFNMQPARAKDEMTAS
VPTVTLVGHHDDADYALDVAPPPNLDSDAGQADTWIVSGGRDCSVLVWCLKDYQSMGPEL
MPRARMVGGRNMSPDLGHTNIVEDVSFNSHDRNIVVSVGRDSAMMLWDTRTTARPTSTVR
KAHVGDINCCDAGGTDQYLIITGGSDHLIKVWDRRYLTNALGERKPIKTLHGHSNQVTNV
MWNKYVPATLASGGEDGQVLLWNIKETDRRPAFSSGLYSVSPELMFRHVGHTQSPSKIVD
FEWHPSESDPWCIASLSETVGEGGSTVQIWRISDLIYREKEEVAADLRQHARSRVY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgcctgtccaacctgtgggttctctgaatgcagatgcgcgcttcgaaatatgg
aaagaccaacacgtacccttgctctacgactggctttcctctcgcaacttggtctggcca
cacgaggcgttgcgttggggagccttgagcccagatgagaataggtcaagagaacgcacc
gttataagcaatggcgccccgtctatcacgcgcgccctgtatttagcggaacggacagga
ccttccaagaacgatcccaataccctcctgcacttcgatgtcaaggtcaccccagagctt
tcgtgcaaaccccaagacatagccaaaccatggcttaatgaggctgttgtcttagagagg
gccgatcaaatgtcgacaagaagcttctggcttcgcaagcgaattatccaccccggcgaa
gtcaatcggatacgcctcgccgcacctggcgtcgttatcacgcataccgataatcctcat
ttgttcgtttgggacttcaatatgcaaccagcaagagcgaaggacgaaatgacagctagc
gtgcccactgtcacactagttggacatcatgacgatgcagattatgccctagatgtcgct
ccacctccaaacctggacagcgatgctggtcaggcggatacatggattgtgagtggcggc
agggattgctctgttcttgtgtggtgccttaaagattaccaaagcatgggaccagagttg
atgccccgtgcgcgtatggtaggaggacgcaacatgtcaccagatttgggacacaccaat
atcgtagaagacgtcagtttcaattcacatgaccgaaacatcgtggtctcagttgggcgg
gactcggcaatgatgttgtgggatacgcgaacaaccgctaggccgacaagcacggttcgg
aaagctcacgtcggagatatcaactgctgtgatgcaggtggaacagatcagtacctcatc
atcaccggcggtagtgatcatttaatcaaagtgtgggatagacgctacctgacaaatgca
cttggggagagaaagcctattaaaacacttcatggccattcgaatcaagtgacaaatgtt
atgtggaacaagtacgttccggccactttggcatccggcggtgaagacgggcaagttcta
ctgtggaacatcaaggaaacagatcgtcggccggcattctcaagtggcttgtattcggtc
agccccgaattgatgttcagacatgtcggacacacccagtctccctcaaagatcgtcgat
tttgagtggcatcccagcgagtctgacccctggtgcatagcgtcactcagcgaaacagtt
ggggaaggaggatctacggtgcaaatatggaggatatctgatttgatttatcgggagaag
gaggaagttgctgctgaccttcgacagcatgctcgatctagagtctactaa
DBGET
integrated database retrieval system