Chondrus crispus (carragheen): CHC_T00006118001
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Entry
CHC_T00006118001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K11883
RNA-binding protein NOB1
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHC_T00006118001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00006118001
03051 Proteasome [BR:
ccp03051
]
CHC_T00006118001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CHC_T00006118001
Proteasome [BR:
ccp03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
CHC_T00006118001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_NOB1
PIN_6
DZR_2
Zn_ribbon_15
DZR
Motif
Other DBs
NCBI-GeneID:
17325895
NCBI-ProteinID:
XP_005718178
UniProt:
R7QKI5
LinkDB
All DBs
AA seq
508 aa
AA seq
DB search
MPSELAPSRWVVLDTGALIAGTDTLYALASLTDPNTNDPLPLLPVDERVTFYITPDVASE
VRDARARARLQALDRLGCVEQRVPSREAVAAVVQAAKNAGDYSVLSAADLRVLALTWMLD
VERNGTKYLKQVAQAPVVGEIRTAPGVGFEEVDRWEADGRERREKEEAEKDGWTTVSTAK
PEQPKKAKKRKSRNRKRAQVEKPQVDTVSAATELVFNVNDDSKEKVLGLATEAEGQALSV
SKPENRRVDGQLAATEASEVSPPGVSSEFHVAEEAVQDAGLTHAEDDSRIGQVSSGLEEE
ISDDDGVGWINEENVEEHLARDGGEEEMTKEDRMRVACVTTDFAMQNTMLQMGLKLLSVD
GRRTIRQIRRFALRCQSCSSVTRELHRKFCEKCGNATLHRVAFKVNKKGVARVFLNPKKK
AILRGTKYPIPLPRGGRHNTDLILTEDQIDPVKQKRIEKQRERLNVDVLDPSNFYNAGAR
FNPHDRPVVVGYGKRNPNQVRRARKGKR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgaattagccccttcccgctgggtagtgctcgatactggtgctctaattgcc
ggcactgatactctttacgccctggccagtctaaccgaccccaacaccaacgaccctctc
cctctacttcccgttgacgagcgagtcaccttctacataacgcccgacgtcgcctctgaa
gtgcgcgatgcccgagcgcgcgcccgcctgcaggctctcgaccgtctgggttgcgtcgag
cagcgcgtcccctcgcgcgaggcagttgccgccgtcgtgcaagccgcgaagaatgcgggc
gattacagcgtcttgtctgcggccgatttgagagtcctagcgcttacgtggatgctggac
gtcgagaggaacggtaccaagtacttgaagcaagttgcccaagctcctgtcgtaggggag
attagaacggccccgggggtcgggtttgaggaagttgacagatgggaagcggatgggagg
gaaaggagggagaaggaagaggcggaaaaggacggctggactacggtctcgactgccaaa
ccggagcagccgaaaaaggcgaagaagaggaagagcagaaacaggaagcgcgcgcaagtg
gaaaagccgcaggtcgatacagtaagcgctgctacagagcttgtgtttaatgtgaatgat
gacagcaaggagaaagtcctggggctggcgactgaagcagaaggtcaggccctttcagtc
tccaaaccagagaataggcgggtggatggacaactggctgcaaccgaggcaagcgaggtc
tctccacccggggtatcttccgagtttcatgttgcggaggaggcagttcaggacgcagga
ctcacacatgctgaagatgacagcagaatagggcaggtcagctccggcttggaagaggaa
atatcagatgacgacggcgttggatggatcaacgaagagaacgtcgaagagcatctcgcc
cgtgacggaggtgaagaggagatgactaaagaggatcgaatgcgcgtcgcctgtgtcaca
actgactttgctatgcagaatacgatgcttcaaatgggtctgaagttactctcagttgat
ggacgtcgcacaatccgtcagattagaagatttgctttacgctgccaatcatgttctagt
gttactcgcgaattgcaccgcaagttttgcgagaagtgcggtaacgcgacgcttcaccgc
gttgcgttcaaggtgaataagaagggcgttgcgcgtgtctttttgaaccccaagaagaag
gctattctcaggggaactaagtatcctatcccattgccacgaggtgggcgacacaacaca
gatctcatattgaccgaggatcagatagatcccgtgaagcagaagcggatagaaaaacaa
cgagagaggctgaatgttgatgtccttgatccgagcaacttttataatgctggggcacga
tttaaccctcacgacagaccagttgttgttggatatgggaagcgaaacccaaatcaagta
aggcgggctcggaaagggaagcggtag
DBGET
integrated database retrieval system
