Chondrus crispus (carragheen): CHC_T00006242001
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Entry
CHC_T00006242001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
CCDC113_CCDC96_CC
ABC_tran
Motif
Other DBs
NCBI-GeneID:
17326132
NCBI-ProteinID:
XP_005718415
UniProt:
R7QJ47
LinkDB
All DBs
AA seq
1216 aa
AA seq
DB search
MPDENSASQAAETAEEEIESDKEAAPTPVAPEVVPSTAPPSRLAIQRLRLENFKSYGGCI
DVGPFHKSFSAIVGPNGSGKSNVIDAMLFVFGRRAKQLRHSKLSELLHNSSAYPKVQSAT
VTVYFHEIIDTGDGELDYEVVSGSEIAVGRTAFRNNTSKYYLNGKEVKMGRVVELLKSKG
VDLDNNRFLILQGEVEQIAMMKPKAVSAHDDGLLEYLEDIIGSNRHIEAIGESARQMESL
NEERGHKMNRVKAAEKERDALEKAKVEAEDYLDKERQLLTKKLKLNSARHQDVAMSFKSN
SEKLAEATEKYEAFRNDVKEKEVGLKELEKTFKETQKSADVAIKTMNEAKDNYSAYERKD
IKLREDIKALKAKEKKLKAAKETEPIRQRLEEKQLELLPFSEEVNKCRKDLEVNQSELKF
LTEKLQAPSKNLSEATASLGRIEEEYHTARETLTCLETERGQIEQTIPGQKHAVIEKEAI
VGDLSSSWSTMRKRVEEARSANDDLKTRSRLHAGILSASRNGELQGVVGRLGDLATVEPK
YAAAVGAAAGSNLDCIVVQSAENAQACIQFLRRKNLGRATFVILDKIMYLRAQMQGWGSS
PRRADGPRLFDFLQIADTEHCTAMYYSLRDTLVADSLESARRMAFKPTRQNRVVSLQGEL
IESSGAMTGGGRGPSRYRLGSGNANSSHLDQRELQNLVQRMDSAKEQIEAQTKTCQDTKR
KGQLEKSVESSEKLLEKALAACEGLEAEITSLQEQIVASGGSSLQNAKEAVEKCHSEIAD
LTSVASRTSSRAAAAKKASEKAREATAAAEEAITSTQESIAEARRQSEEMLDDAEVVLRK
YQDTEVVHKEWEEKVAKIQAEYSEVKNGLKQVRRKEVSLSEALQDVKRVAAHDKQELRIL
QKKEQNMKARLRKLSLVSVDMQVAADSADAEEKDVEETQKKSNEKENLVEEREELKMSAQ
DQKQLSMEITVLESELSKLSPNIGAIAEYQSKDAEYKSQVNELDALTANRDNARKQCDSL
RKMRLDEFMAGFSVITLKLKELYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKN
ISNLSGGEKTLSSLALVFALHHFKPTPLYFLDEIDAALDYKNVSIVANYVKDRTKNAQFI
IISLRNNMFELADRLVGIYKTHNTTKSVTVDPAAFRDAIRGFSLSEPRQIKFLRAAQNHL
PLIHNDSLLTLSRWMS
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgaaaactctgcttcgcaagcagctgaaactgccgaagaagaaatcgagtcg
gacaaggaggcagcgccaactccggtagcccctgaagttgtaccctctacggcccctccc
tcacggctcgcgattcagcgattgcgtcttgaaaacttcaagagctatggcgggtgcatt
gatgtaggcccattccacaagagcttctcagctattgtcggtccaaatgggtcgggtaag
agcaacgtcatcgacgcgatgcttttcgtttttgggcgacgtgcgaagcagcttcgtcac
tcaaagctttctgaactgttgcataattcgagcgcctatcctaaggtccagtccgcgact
gtgaccgtttactttcatgaaatcatcgatacgggcgatggtgagcttgactacgaagtc
gtttctggttctgaaattgcagttggaaggactgcgtttcggaacaatacctcgaagtac
tacctcaatggaaaggaagtgaaaatgggaagggttgttgagctgctcaagtcgaaaggt
gtcgaccttgacaataaccgctttctcattcttcaaggtgaggtcgagcaaattgcgatg
atgaaacctaaggccgtatctgcgcatgatgacggccttttggaatatttggaagatata
atagggtcgaacaggcacattgaagccatcggagagagtgccaggcagatggaaagtctc
aacgaggaacgagggcataaaatgaatcgcgtcaaggctgctgagaaggagcgcgacgcc
ctcgagaaagcaaaagttgaagcagaggactacctagataaggaaagacagcttttaaca
aagaagctcaagctgaatagtgcaaggcatcaagatgtggccatgtccttcaagtcgaac
agtgaaaagcttgccgaggcgactgagaaatacgaagcgttcagaaatgatgtgaaagag
aaagaagtggggctcaaagaactcgagaaaactttcaaagagacgcaaaagagtgcggac
gttgccattaagaccatgaatgaggccaaagataattactctgcatatgagaggaaggat
atcaagctgcgcgaagacatcaaggctttgaaagcgaaagagaaaaagctaaaggccgcc
aaagaaaccgagcctattcgacagcgcctagaggagaaacagctggagttgttgccattt
tcggaagaagtgaataagtgtcgaaaggacttggaagtaaatcagtcagagctcaaattc
ttgaccgaaaagctacaggctccaagcaaaaacctttcagaagcaaccgcctcgcttggg
cgcatagaagaggaataccataccgcacgggaaactctaacctgtctggaaacggagaga
ggtcaaatcgagcaaactatacctggtcaaaagcatgctgttatagagaaggaagcgatt
gtaggcgacttgtcgtcatcttggtctacaatgagaaagcgtgtggaagaagcacgatca
gcaaatgatgatctcaagacgcgctctagattacacgctggtattctttccgcgtctcga
aatggtgagctacagggagtagtggggcgcttgggagatcttgcgaccgtggagcccaag
tatgcagctgccgtcggcgctgcagctgggtcgaacctcgattgcattgtcgttcagagt
gctgaaaatgcacaagcatgcattcagtttcttcgtcggaagaacttgggacgggcgacc
tttgtcattctggacaaaatcatgtacttacgtgcacagatgcaaggatggggttcttct
cctcgccgagctgatggtcctcgtctcttcgatttcctccaaatcgcagacactgaacac
tgcacagcaatgtattattcgcttcgggacacactcgtggcagactctttagagagtgca
cgacgaatggcgtttaaaccaactagacaaaatcgcgtcgtcagtcttcagggggaactt
atcgagtcatctggggctatgactgggggtggcagggggccttcccggtacaggctgggg
tcaggaaacgcgaacagttctcacctagatcaaagagagctgcaaaatcttgtgcaaaga
atggactcggcaaaagagcaaatcgaagcgcagacaaaaacatgtcaagacactaaacga
aaaggacagttggaaaagtcagttgagtctagcgagaagttgctcgagaaggccctcgct
gcctgcgaaggactggaggccgaaataacttcgcttcaagagcaaatagttgcttcaggg
ggttcgtcactccagaacgcaaaggaggccgttgagaagtgtcattccgaaattgccgat
ttaaccagcgttgcttcgcgcacgtcgtcaagagcggcggcagccaaaaaagcaagcgaa
aaggcccgtgaggcaactgcggccgctgaagaagcgatcacgtctactcaggaaagcatc
gccgaggctcggagacagagcgaggaaatgcttgacgacgctgaagtcgtgctgcggaag
tatcaagataccgaagtggttcataaagagtgggaggagaaagtggcaaagatacaggct
gaatattcggaggtgaagaatggattgaagcaggtcagaaggaaggaggtatctctatca
gaggcccttcaggatgtaaagcgtgtagcagcgcatgacaagcaggaacttcgtatcctg
cagaagaaggagcaaaatatgaaggccaggctgaggaagctctctctggtctctgtggac
atgcaagtagcagccgacagcgcagatgctgaagaaaaagatgtcgaagagacacaaaaa
aagagtaatgaaaaagagaatttggttgaagaacgtgaggagttgaaaatgtcagcgcag
gatcaaaagcaattgtcgatggaaatcacagtattggaaagtgagctttcaaagctgagt
ccgaacatcggggcaatcgcggaatatcaaagcaaagatgcggagtataagtcgcaagtg
aatgaactagacgcgctgacagccaaccgagataatgcgcgcaagcagtgcgactcgctt
cgaaagatgaggttggatgaattcatggccgggttcagtgtcatcacgttgaagttgaag
gaactttaccagatgatcacgcttggcggtgatgctgaacttgagctggtggactctctc
gaccccttttcggaaggaattgtgttctctgttaggccaccgaagaagagctggaagaat
atctccaatctaagtggaggtgaaaagaccttgagctctcttgctctggtatttgctctg
caccatttcaaaccaacacctttgtacttccttgacgagattgacgcggcacttgactac
aagaatgtcagtatagtggcaaactatgtgaaagatcgaactaagaatgcgcagtttatt
attatttctcttcgcaacaatatgttcgagcttgccgatcgtctggtcgggatatataag
acgcacaatactacgaagagtgtcacggtagatcccgctgcattccgagacgccatacgc
ggtttctcattgtcagagccgaggcaaattaaatttctgcgtgcagcgcaaaatcacttg
ccactgattcacaacgattccttgctcacactgtcaagatggatgtcatga
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integrated database retrieval system
