Chondrus crispus (carragheen): CHC_T00006277001 Help Entry CHC_T00006277001  CDS       T02916                                  Name (RefSeq) hypothetical protein   KO K10597   ubiquitin conjugation factor E4 B [EC:2.3.2.27] Organism ccp  Chondrus crispus (carragheen) Pathway ccp04120   Ubiquitin mediated proteolysis ccp04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:ccp00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     CHC_T00006277001    04120 Ubiquitin mediated proteolysis     CHC_T00006277001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:ccp04121]     CHC_T00006277001 Enzymes [BR:ccp01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      CHC_T00006277001 Ubiquitin system [BR:ccp04121]  Ubiquitin ligases (E3)   U-box type E3    CHC_T00006277001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ufd2P_core U-box TcdB_N Motif Other DBs NCBI-GeneID:  17325676 NCBI-ProteinID:  XP_005717957 UniProt:  R7QK21 LinkDB All DBs AA seq 1133 aa AA seqDB search MNWFRANAPSDGANPDQEQADGSAALTPDEIRRRRLAKLEASHAAEKARRKELEERRAKW EAEKAAREAAAPKPPSPPPVPTPREPEPIEEPVPKRPAAPLQTLEAAVSKVVAKSLRIAI TPLQAVGGCEYLPDLVDGLRQEAGVKEGETLLLEVDLHADDILIDRINGSKDPLGYLFDC FVRCGQQVSEINSNRRIMGEEHADRRMTLQQTVAEVQRRIMTYSGMLLNGSFMETDNVKP EAFAECILQQKVPTGFIRSLLSFHAEQDGPGLDDILPVFTRVFRAVRHEALTNMKLSSSS FLKPLNALVGLLKHKELCVLVTSDTSFVPKGTDARPLNVTMFNTLSFLAPFFAISALPGL PLHAPSRIEDPQIANTMFANPTMLDRVSAEGIIYSLRSSLSVARARLHQICLMLCKAGAQ PRNAVLSWFATILNLNQKRTAMQVDYAEVSGDGFMLNVMHVLLQFCEPIVNGGWKMLQKI DPTFPQSSHRLDYEDATRLAADSDMLKRWWVDQRNENAQESLTRHLEAAARESGATASAS SSQAASGSEDAQVAPQQVAKEFGFVTECFWLALSSIHLGFIAVENMYEESILRTLRQLKD VIDEMEAAKSVHRLPPRGLMQLVAFKQRRDSLASAKLCYDVYVQDPETLTTLVRFAAADA EWLMKKLLQEPARESLLPLPVPPHPTFASLPEHTVEAITTTLLCTMRFRPEIVDDNSALL EDIVSFCIAGSASPLHLKNPYLRAKLIEFLWMIFPRGMGGVQDDEDEEYRGPRNPGMEAL FSGHSLSRRFLPGALFRLYVDVEHTGSHTQFYDKFSIRYRIGSIVESLWYMADYRKSVRV EAQDEGRFLRFVNMVLNDANHLLDSVLDDLEEMNTLEGVIKGGSAEWEGLTDEEKEEKRE RLKKLEGSAKTYNQLANNNVKLLWLLTDDAVVRRIFLRDEMVSRLTEMLNYLLVRLCEKR CRDLKVSEPEKVSWKPRLLLTRIIQTYVHFGEDETFAKAVGLDGRSYKKELLPRAIGIAT RRRLVSAQEIQVLREIAERAEKAVKEDEEEEGALGEIPDEFLDPIMSSVMRNPVRLPTSG NIMDRAVICRILLSDKVDPFNRKLLTEDMLVEEVELKERIETFIKSRRGGGRP NT seq 3402 nt NT seq  +upstreamnt  +downstreamnt atgaattggttccgcgccaatgcgccgagcgacggcgccaaccccgatcaggaacaggcc gacggtagcgccgccttgacgccggacgagatccgtcgccgccgcctcgccaagctcgaa gcgtcgcacgctgccgaaaaggcccgccgcaaggagctggaagagcgccgcgccaaatgg gaagccgagaaggccgcccgtgaggccgccgcgcccaagccgccatccccgccgccagtc ccgacgccgcgcgaaccagaaccgatcgaggagccagtgcccaaacgccccgcggcaccg ctgcaaacactggaagcagccgtgtctaaggtcgtcgcgaagagccttcgtatcgccatc acgccgctgcaggccgttggaggctgcgagtatctcccggatctcgtcgatgggctcaga caggaagcgggagtgaaggaaggggagacgttgctgcttgaggtcgatctgcatgcggat gatatcttgattgatcgtattaacggctcgaaggatccgctgggctatctctttgactgc tttgtaaggtgtgggcagcaagtgtctgagattaactccaaccgccgcattatgggtgag gagcatgcggatagacgcatgacgttgcaacagactgtcgccgaagttcagagacgcatt atgacgtactcgggaatgcttttgaacgggtcgttcatggaaactgacaacgttaaacca gaagcgtttgctgaatgcatactgcaacagaaagtcccgactggatttattcggtcgctg ctcagttttcacgctgagcaggacggacctggtttggatgacattcttccagtcttcacg cgagtctttcgcgcggttcgccatgaagccctcacaaacatgaagctctcgtcgagctct ttccttaagccactcaacgccctggtcgggctccttaagcataaggaactgtgcgtactc gtcacctcggatacgagttttgtgccaaaaggaaccgacgcgaggcccttaaacgtcacc atgttcaataccctatcctttctcgcgcctttctttgcgatatctgccctgcccggtctc ccgctgcatgcgccatctcgcattgaagacccgcaaatagccaacacgatgttcgcaaat ccgacaatgcttgaccgcgtttctgccgaaggaataatttactctcttcgatcctcgctt tcggtcgcgcgggctcgcctgcatcaaatatgcctcatgttgtgcaaagccggcgcacaa cctcgaaatgcagtcctcagttggtttgcaacaattctgaatctgaaccaaaagcgtacc gccatgcaggtcgactatgcagaagtttctggagatggattcatgctcaacgtcatgcat gtgcttctccagttttgtgaaccgatcgtgaatgggggttggaaaatgctgcagaagatt gatcctacctttccgcagtcgtctcatcggcttgactacgaagacgcaaccaggctcgca gcggattcagacatgctgaagaggtggtgggttgatcaaaggaacgaaaacgcgcaagag tctctcaccagacacctcgaggctgctgcaagagaatctggcgctacagcttcagcctcc agctcacaagctgctagtgggtcagaagatgcacaggtggctccacaacaagttgccaag gaattcggttttgtgacggaatgcttctggctcgcacttagctcaatccacctcggattc attgcagtagaaaatatgtatgaagaatcaattttgcgaacgctgcgtcaactcaaggac gtgatagatgagatggaagcagccaaaagtgttcacagactgccaccgaggggattgatg caactagttgcgttcaaacagcggagagatagccttgcgtctgcaaagctgtgctacgat gtgtacgtacaagatcccgagactctaacgacactggtgcggtttgcagctgcagatgcc gaatggttgatgaagaagttgcttcaagaaccagcacgggaatcattactgcctctacca gttcctccacatccaacgtttgcgtcattacctgaacacacagtggaggcgatcacgaca actcttctgtgtacgatgcgatttagacctgagatagtagatgataatagtgcgcttttg gaagacattgtgagcttttgcatcgccgggtcagcatcaccgctgcacttaaaaaaccct tatctacgagcaaagctgatagaattcttgtggatgatattcccgagagggatgggtggg gtgcaagatgacgaggacgaagagtatcgtggaccccggaacccagggatggaggcactg ttttccgggcattcactttcgcgaagatttctacccggagcgctgtttcgtctgtatgta gatgtggagcatacaggatcgcacacgcagttttacgacaagttttccatccggtaccga attggatcgattgttgaatcgctttggtacatggcagactatcgaaagtctgtgagagtg gaggcacaagatgaggggcgttttctccgttttgtgaacatggttttaaacgatgccaac cacctgttggactcggtgttggacgatttggaggagatgaatacgcttgaaggggtgatt aaagggggatctgcagaatgggaggggctgacagacgaggagaaagaggaaaagcgggag cgattaaagaaactggaggggtcggccaaaacgtacaaccagttggccaacaacaacgtg aagctgttatggctactgacggatgatgcggttgtgcgacgaattttcttacgcgatgag atggtgagtcggttgacagaaatgctgaactacctgctggtgcggttgtgtgaaaagaga tgccgagacctcaaggtgtctgaaccggaaaaagtgtcgtggaaaccgcgactgctccta acacgaattattcaaacatacgtgcactttggcgaggacgagacatttgcaaaggctgtg ggactggatgggcgttcgtataagaaggagctgttgccgcgagctatcgggattgcgacg cgacgacggttggtgagtgcgcaggaaatacaggtattaagagaaatcgcggaacgggcg gagaaggcagtgaaagaggacgaggaagaggaaggggcgctgggggagatcccagacgag ttcctagacccgatcatgagcagcgtgatgagaaaccctgttcggctaccgacatcgggg aatatcatggaccgtgcggtaatctgtcgaattctgctaagtgacaaggtggacccgttc aatcggaagttgttgactgaggacatgttggtggaggaggtggagctgaaggagcggata gaaacgttcattaagtcgcggcgtggtggggggaggccgtga

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