Chondrus crispus (carragheen): CHC_T00006305001
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Entry
CHC_T00006305001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccp03032
]
CHC_T00006305001
03036 Chromosome and associated proteins [BR:
ccp03036
]
CHC_T00006305001
Enzymes [BR:
ccp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CHC_T00006305001
DNA replication proteins [BR:
ccp03032
]
Eukaryotic type
DNA Topoisomerases
CHC_T00006305001
Chromosome and associated proteins [BR:
ccp03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
CHC_T00006305001
Centrosome formation proteins
Centriole proteins
CHC_T00006305001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
17325703
NCBI-ProteinID:
XP_005717991
UniProt:
R7QHX8
LinkDB
All DBs
AA seq
1427 aa
AA seq
DB search
MNTIKVEIDTENQLISVWNNGAGIPVEIHQKEKIYVPELIFGNLLTSSNYDDDEKKVVGG
RNGFGAKLANIFSNEFTVETADAQRGKKYKQVFRKNMSEKDKPSIKSNGKKEAYTKISFS
PDLTRFGMTHLDDDIVSLMKKRVYDIAGISSNLKVYLNGKKIPVKSFKDYVALYNDKGGP
STVMYERISDRWEVAITASEGQLTQLSFVNSIWTIKGGTHVTHVADQIVSKVAEHIAKKN
KGTKVKPFQIKSQLSLYINCLIENPSFDSQTKETLTTKPSKFGSKWSLSADLTKKVMNSE
IIENVLAFAKFKESKELAKTDGGKRVRLTGITKFYDANRAGTREGSKCTLVLTEGDSAMA
TAFSGLSVVGRDYYGVYPLRGKMLNVREAKHKQIMDNKEINNLKKILGLQHNKKYCKETM
KSLRYGHVLIMADQDHDGSHIKGLIINFFDHFWPGLLQIDGFLQELITPIVQCTKGQKKK
VFFTIPEYETFCESSESAGWEGKYFKGLGTSTSADAKSYFSDLPTHLHEFKHTGVNDTDM
IELAFSKQRVNDRKDWIASYAPGTYFHHGVDELNYANFVNKELILFSVYDNERSIPCVVD
GFKPSQRKVMFGCFKRKLTKKELKVVQLAGYISEQTAYRHGDVSLQSTIVGLGQNFVGSN
NLNFLVPAGQFGTRLTGGKDAASARYICTKLAPIARAMFPEADDAVLSYLVDEDKVIEPK
WYCPIIPTVLVNGSEGIGTGWSSSVPCYNPRELIANIRRLLAGNRMEPMMPWYRGFNGSI
VPVQNSKSYDIYGTLRKSSEENVFKVEELPIKAWTSAYKDFLESVLIGSSEGDSPFLKDF
HDNSTENTVNFTLMTTPAVSRTLSSSEGYKKLKLTSSVTTSNMVLFNKDGRLRKYENPEE
ILQEFFETRYALYEDRRLHLLKELEQKLLCLDNKQRFILLVIDDKLKVAKRRKDQLLADL
VRLKFDPIHTGKAKKGSPADTPASDSEENDNSPQSGDKRYDYLLSMPLWSLTAERVANLA
DQRNKTKAEKDAMEEVTVEDIWEADLCRLEEAIVREEKETAVMAKDLERVAKVAHARQQK
GRGRKGAKKYDETIIGDLEVVPLPNARSAALKKVRARKTTAEEKKSIVRGSNTAARKKNA
KDSPDDDMVDIISLRDSSSEESDDEEDIVHLMDDVALDDDEVRKPSLPKTRRPQKRSAKR
AADIPDDLSEDDMFETQPKAKRTVRTTRTKTSKRDVIDISTSEDDDKSTMKENRSTANNV
GLDFSVDSDEDESLSLSQRLAKRLTVSDDAPKKSGKAKTPSNNPVPKQRPSRAGFTKRSR
EPAPKKSVGEGSVFSPSPSPQQKKTRVRSPQARKNSKRPTTSARGSEDLTEGGDVGTVEV
ETRPRRQRATKKKVVFSESESSGEEDDDFLCSDDDFEGCADDDSDFE
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgattaaagtcgagattgacaccgagaatcaactcatttctgtctggaacaac
ggtgctggtattccagtggaaattcatcagaaggagaagatctatgtcccagagcttatc
ttcggaaacctattaacttcttccaactacgatgatgacgagaaaaaggtcgtcggtggt
cgtaatggatttggggccaaacttgcaaacattttctctaacgagttcactgtggagact
gcagatgcccagcgtgggaagaaatacaagcaagtctttcgtaaaaacatgagcgaaaag
gataaacccagcatcaaatcgaacggcaaaaaggaagcctacaccaaaatttccttctcc
ccagatctcactcgctttggcatgacccatctagacgacgatattgtctctctcatgaag
aagagagtgtatgacatcgccggtattagctctaatctcaaagtctacctcaacggcaag
aagattccggtcaagtctttcaaggattatgtcgccttgtataacgacaagggtggtccc
agcactgtgatgtacgaaagaatcagcgaccgatgggaggtggccatcacagcaagtgag
ggacaactcacacaacttagttttgtcaattcgatctggactatcaagggcggaactcac
gtgacccatgtcgccgaccaaatcgtgtccaaagttgccgagcatattgctaagaaaaac
aagggtactaaagtcaaaccctttcagattaagagtcagttgtccttgtacatcaactgc
ctcattgagaacccatcgtttgattcacaaacaaaggaaacgctgacgactaagccgagt
aagtttggctcgaaatggtctctttctgctgatctcacgaagaaggtcatgaacagtgaa
atcattgaaaacgttctcgcctttgctaagttcaaggaatcaaaggaactcgcgaaaacg
gatggaggcaagcgagtgaggcttaccggaatcacaaaattctacgacgcgaatagagca
ggtacacgtgagggttcaaaatgcacgctcgttttaacagagggagattcggctatggcc
acagccttctcaggactctctgtagttgggagggactactacggtgtctatccgttacgt
ggaaagatgctgaatgtgcgagaagccaagcataaacaaatcatggacaacaaggagatc
aacaacctcaagaaaatccttggtctgcagcacaataaaaaatactgcaaagaaaccatg
aagtctcttcgctatggtcacgtcctgatcatggcagatcaagaccatgacggctctcac
attaagggtctcatcatcaacttcttcgatcacttctggccgggtcttctgcagatagat
ggcttcttacaggaattaattaccccaatcgtgcagtgcaccaaaggacagaagaaaaag
gtcttcttcactatacccgaatacgaaacattttgcgagagttcagaatcagctggatgg
gaaggcaagtatttcaagggtttgggaacttcaacgtctgcagatgcgaagtcatatttt
tcggatctcccgacacatttgcatgaattcaaacacacaggggtgaatgacacagacatg
atcgagttggcgttcagcaagcaacgtgtgaatgatcggaaagactggattgcgtcgtat
gctcctgggacgtattttcatcacggagttgatgagctgaactacgcaaattttgtgaac
aaagaattgattcttttctccgtgtacgacaatgaacgatcaattccgtgtgtcgttgac
ggtttcaagccatcacaacgaaaggttatgtttggctgctttaagaggaagctcacgaag
aaagagctgaaggtagtccaacttgcaggctatatatctgaacagactgcttatcgccac
ggagatgtatctttgcaatcaacaatcgttgggctggggcaaaatttcgtggggtccaac
aaccttaattttttggttccggcgggtcagttcggtaccagactaacaggtggaaaagat
gctgcgagcgctcggtacatctgcacaaaactagccccgattgctcgagccatgttccct
gaagcagatgatgccgttttgtcctatcttgtcgatgaggacaaggtaatcgaaccgaag
tggtactgcccaatcattccgacagtcctggtaaacggatcagaaggaattggtactggt
tggtcttcgtccgtgccgtgctataacccaagggaactgatagcaaacatacgaagatta
cttgcaggaaaccggatggaaccaatgatgccatggtaccgtggattcaatggttctatt
gtaccagttcaaaactcaaaatcctacgatatttacgggactttgcgaaaatcatcagag
gaaaatgtattcaaagttgaagaactccccattaaggcatggacatcggcatacaaggat
ttccttgagtccgttttgatcgggagctctgagggagattctccatttctgaaagacttc
catgacaacagcactgagaacactgtcaacttcaccctcatgacgactccagctgttagc
aggactctttcatcatcagaaggctacaaaaagctcaaactgacaagctccgtaacaacg
agcaacatggtcctttttaacaaggatgggcgcttgcgaaaatacgagaatcctgaagaa
attcttcaggaattctttgagacgcggtatgccctttatgaagataggcgccttcatcta
ttgaaagagcttgaacaaaagcttctctgtctagacaacaaacagcgctttatccttttg
gtgatcgacgacaaattgaaggtcgccaaacgcagaaaggatcagctgcttgcagatctg
gtgcgactgaagttcgaccctatccacacgggtaaagcgaagaaaggctctccagcagat
actccggccagtgatagtgaagagaacgataatagtccgcaatctggggacaaaaggtac
gactacttgctttccatgccactatggtctttaaccgctgaaagagttgccaatcttgct
gaccagcgcaacaagaccaaggcagaaaaggatgcaatggaagaagttaccgtagaagat
atatgggaggcggatttgtgtaggctagaagaagctatcgttcgagaagagaaggagacc
gcggtgatggcgaaggatcttgagagggttgcgaaagtagcccatgcacgtcagcagaaa
gggcgaggcaggaaaggtgccaaaaagtatgatgaaactatcattggcgatttagaagtc
gtgccgttgccaaatgcgagaagtgcagctttgaagaaggtcagagcacggaaaacgact
gctgaagaaaagaagagtatcgttagaggctccaacacagctgcgagaaagaagaatgca
aaggacagtcctgatgatgatatggtcgacataatttcattgcgggacagctcgtccgag
gaatccgacgatgaggaggacattgttcatttaatggacgacgtggcacttgacgacgac
gaggtaagaaaaccttctctgccaaagacaagaaggccacagaaaaggtctgctaagcgc
gcagcggacatccctgatgatttgtctgaggatgacatgtttgagacccaacctaaagcc
aaacgcacagtgagaactactcgcacaaagacgagcaagcgtgacgtaatcgatatctca
acttctgaagacgatgataaatcgactatgaaagagaacaggtcaacagcaaacaatgtc
ggtcttgacttttctgtcgatagcgatgaggacgaatcgctctcattgagtcaacggttg
gcgaaaaggctaaccgtctctgatgatgcaccaaagaaaagtggaaaggccaagacgcct
tccaataacccggttccgaaacaaaggcctagccgcgctggtttcacaaagaggtcccgc
gaacctgcgccgaagaaaagcgtgggagagggttcggtattttcaccatctccatctcca
caacagaagaagacccgtgtccgcagtccacaagctcgaaaaaactcaaagcggccaaca
acgagcgctcggggcagtgaagatctgacagagggcggcgacgtaggcaccgtcgaagtt
gagactcgtccgagacgccaacgcgcaacgaagaaaaaagtcgttttcagtgaatcagaa
tcctctggcgaggaggacgatgattttctgtgttctgatgacgattttgagggctgcgca
gacgacgatagtgattttgaatag
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integrated database retrieval system
