Chondrus crispus (carragheen): CHC_T00006367001 Help Entry CHC_T00006367001  CDS       T02916                                  Name (RefSeq) hypothetical protein   KO K07204   regulatory associated protein of mTOR Organism ccp  Chondrus crispus (carragheen) Pathway ccp04136   Autophagy - other Brite KEGG Orthology (KO) [BR:ccp00001]  09140 Cellular Processes   09141 Transport and catabolism    04136 Autophagy - other     CHC_T00006367001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccp04131]     CHC_T00006367001 Membrane trafficking [BR:ccp04131]  Autophagy   Other autophagy associated proteins    mTORC1 complex     CHC_T00006367001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Raptor_N WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd HEAT Beta-prop_EML HEAT_2 WD40_RFWD3 Beta-prop_EIPR1 Motif Other DBs NCBI-GeneID:  17326497 NCBI-ProteinID:  XP_005718781 UniProt:  R7QN17 LinkDB All DBs AA seq 1738 aa AA seqDB search MYTTHFVLMVCLNVGVDPPGARRPTPSAKLECWIDPTAHNQNGTAVKTVITQLKKQYAQW QPHHKKFKLADDPVAKDVRSACGTLRKQAKDDRVLFHYNGHGVPDPTSQGELWVFNNNFT QYIPFPLDTLFKHLGSPAILVFDCNSAERIVDQYKQYRDDNRSASRHSPPFLSHQSDIML AACSDGERLPLTPQLPADLFTSCLTTPIKTILHWFVRQTLVAGITDDMVDRIPGSLSDRS SPLGELNWIFLSVTDAIAWNLLPREEFLRLYRQDMFLSSLLRHYLLAERVMRSFGCHTVS SPKIPEAFDHNLWKAFDVAVEKLFSQLPRLIAEEEAKEAAAFSTSQHSTATTHAQPSGTT PHANGLPPSRPGRPSGRSSAAMLSSPHHHRHHHHQRHRHNRHRSSPHGNLHRPLGTPFVN DMGSSGSLESMHSSYRGSYQPSTFFADQLKAFDVWLDMGPEHRGPPEQLPIMLQVLLSDE LREIALPLLSRYVQTGPMAVDYFLSVGIFPYIIRLTESRTKHQRQELVFIWSKILALDHS CTEDLIEIEGDSFFMDFLKVDESQQEPKPVYLAVAMFVLSVIARKDPNRCRFLQSTDACI PYLRHSNSTVRRWACLSIMTVIRVAPYQMQSQFLSRDALLEPVEQCAMNDASPDVRASAT ELLSTLMGQILRHNSPYYFDDRGASSQGSKTDYFLNPVKTDMTPIHMSNSTPAVDLPLIG VEGRRNGSRTKTAAEVVMENTIHTPLVQTEFLSAPVPPYTACERNALLLLGRKIADIARR DSCVVVRREVSTAIAQAVRSQIDRFLCAAYVTDVLGTNEAWEEFRSDDEQRCSAVYRQLW MTLSELANDPHPIVAALARRSYDLISELLLERAGPLRRTDSSSQSQDDILGADHIFSPSS CRNSNFLTSASSLQGGRSGIERTPSAAVGECPGGSSSARSSSASPRIGLQGESNTGQESR IPLVNGTFKEGSTPPLVGGSQGRISQSPSIRACPRGMRRSFPQRPFDVQGGSVHVRSTSG SFDLNASSRLPLMTAMPRVNSASLIPPTSLRRRLPTVASTQDFASSRFERGTSETEERPR SLPTSVPHIAIAVGRFFRQFTEPIQRPGGEPTSNLPHSFGSNASSTGGKEDGKGTSSSSH SPPGVPRRSISYQVLNAETALNSSTEIPIAASGRPSFFASATHEGSSESLPKLVKIPEGY DRLYLSQGGDAALSLLEWSSASVARLEFDATQIDNSQQKESVPRYAALWDKFLKSSGNIP SEGLRAFALLGEGQNGMGGGSCGQENGNGQGYQFQEISSHVMTISGGAVTSIAFLPRDVG IGEEQLIASGDNQGFVGIYDIQNGRLHAKMAVPHPPGIPPVGVSAVLCLNRPSPAAMDSY PSFGNSRSALILAGAYDGRVAIFKSEPHGPKYRVMSTFQSSGQSYWSKVGTIREPEKKPK RHDVMGGTYHSSDSMESLDSYDMTFAKTVKDSGNGLVLAFDSESSYLVAGGCDGEAVRVW DLAREYCIWEGAGVATGTWPTAVTMWGRINPKVFVTGSSDGTISIIDIRSGPAFAGPPVQ LTHFGEQKHPIISLGTYSPFSGSPCETVVSADIGGEIAFWDSRLSRNSPAPLAMETPPSL SHIKAHRNNLTCMSVHPAGTLIASGSTARCVKIFGPNRAMLKMMSAHDRDSGHDLTGDDP LVPPVTCLSFQPDSNMLAIGSLESTVMVYGQPDTFPGVYAQEDEIQQAKRAVLSEYGN NT seq 5217 nt NT seq  +upstreamnt  +downstreamnt atgtacactacccactttgtgcttatggtctgtctcaacgtcggcgtcgacccaccgggc gcccgcaggcccactccttcagccaagctcgagtgctggatcgacccaacggcgcacaat cagaatggcacggcggtgaagactgtcatcacgcagctcaagaaacaatatgcgcaatgg caaccgcatcacaaaaagttcaagctcgcagacgatcccgtcgcgaaggatgtgcgctcg gcttgcggtacattgagaaaacaggcaaaggatgatcgcgtcttgtttcattataacggg catggcgtcccggatcccactagccagggcgagctctgggtatttaacaacaacttcact cagtacatcccttttccacttgatacgttgttcaagcatctaggcagtccggccattctc gttttcgactgcaactctgctgaacgtattgttgatcagtacaaacagtatcgagatgac aatcgcagtgcttcgcggcactcaccgccgttcttgagccatcaaagtgacattatgctt gctgcttgcagtgatggtgagcgtcttccgcttactccgcaattgcccgcagatctcttt actagctgcctcactacccccatcaaaaccatactgcattggtttgttcggcaaaccctt gtcgcgggtatcactgatgacatggtcgaccgtatcccagggtcgctatcggatcggagt agcccactcggcgagttaaattggatatttttgtctgtcaccgatgctatcgcttggaat cttctcccgcgagaggagtttttaagactctatcgacaggatatgttcctttccagctta ctacgccattatttacttgcagaacgtgtcatgcggtcctttggatgccacacggtgtct tctccgaaaattccagaggcgtttgaccacaacctgtggaaggcgtttgatgttgccgtt gagaagctgttttctcagcttccccggctcattgctgaggaagaagcaaaggaagccgct gccttctctacgtcacagcactccaccgcaaccacacatgcccaaccaagtggtaccact ccccatgccaatggcctgcctccctcacgtcctggccgtccaagtggcaggtcttcggca gcgatgttatcatccccccatcatcaccgtcatcatcatcaccaacgtcatcgccacaac cgtcaccgatcttctccccacggaaaccttcatagaccactaggtactcctttcgtcaac gatatgggaagttccgggtccttagagtccatgcattcatcctatcgcggttcataccaa ccatccacgttctttgcggaccagttaaaagccttcgacgtctggcttgatatgggcccg gagcaccgcggcccaccagaacaactcccgatcatgcttcaagtcttgttgagtgacgaa ttgagagagatagccttgccgctcctttcaagatatgtgcaaaccggacccatggccgta gattattttctatctgtcggtatattcccctacataatcagactgacggaaagtcgcacc aagcatcagagacaagagctggtctttatatggagcaagattttggcactggaccactct tgcactgaggatcttattgaaatcgaaggtgattctttctttatggactttctaaaggtc gatgagtcacaacaagagcccaagcctgtctatctagccgtggctatgtttgttttgtct gtcattgcaagaaaagatcccaatcggtgtcggtttcttcaatcaacggatgcatgcatt ccgtatttacgccactcaaatagtaccgtgcgacgatgggcatgcctaagcataatgact gtgattcgtgtcgctccttatcaaatgcaatctcagttcttaagcagagacgcgttactg gaacctgtagagcaatgcgctatgaacgacgcatccccagacgtgcgggcgtctgccact gaattattgtctacactgatggggcagatactgcgacataattctccatactattttgac gataggggggcttcgtcgcaaggctcgaagactgattatttcctgaacccagtgaaaacg gacatgacacccatccatatgagtaattctacacccgctgttgatttgcccctaatagga gtcgagggaaggaggaatggttcgcgaactaagacggcagctgaagttgtcatggaaaat actatacacacaccgttagttcaaacagaatttctgagtgcccctgtaccgccgtacacc gcttgtgaacgaaatgcccttctcttgcttggaagaaaaatagcagatattgcgagaaga gattcgtgcgtggttgtgcgaagagaagtctctaccgcaattgctcaggcagtccgctcg cagattgaccggtttctctgtgctgcatacgtcacagatgttctaggtacgaatgaagcc tgggaagaattccgttccgacgatgaacagaggtgttcagcagtgtatcgacaattgtgg atgactttatcggagttggcgaatgaccctcatccgattgtagcagcactagcgcgccgg agctatgatttgatatccgaacttttgctcgaacgagcagggccattgcgcaggacggat agttcaagccaatcacaagacgatattctaggggcagatcacattttttccccttcttct tgtcggaatagcaacttcttgacttccgcgtcatctttacaaggtgggagatctggcatt gaacggacaccttctgctgccgttggagaatgtccgggaggttcgtcatctgcgcgctca tccagcgcaagcccaagaattggattgcaaggcgaatccaacacaggacaggaatcacgg attccattagtcaatggtacttttaaggaagggagcacaccgcctctggtagggggctct cagggcaggatatctcaaagcccctccattcgagcgtgtccccgaggtatgagacgatcg ttcccacaacgtccttttgatgttcagggggggagtgttcatgtgcgcagcacgagcggc agtttcgatttgaatgcgtcaagtcgcctcccgctaatgacggccatgccccgagtcaat agcgcaagcctcattccccctacttcactccggcgaaggctcccaacagttgcttccacc caagattttgcttcgagtaggtttgaacggggtactagtgaaactgaagaaagaccgcgg tctcttcctacatccgttcctcatatcgctatagccgtggggaggttttttaggcagttc actgaaccaatacaacggcccggaggagaacccacatcaaacctgccgcattctttcgga agcaacgccagttctacaggtggtaaagaagacggcaagggcacatcgtcaagctcacat tctccgcccggggtgccaagacgtagcatttcctaccaagttctaaatgcggaaactgcc ttgaattcaagtacggaaattcccattgcagcatctggcaggccctccttctttgcatcc gccactcacgaaggttcaagtgagagcttgccaaagttagtgaagattcctgaaggctac gatcgattatatttatcacaaggtggagacgcggccctgtcgcttcttgaatggagcagt gcgtcagttgctcgacttgaatttgacgccacgcagattgacaactcgcaacagaaggaa agtgtaccgcgatatgctgctttgtgggacaaattcctcaagtcaagcggtaatatcccc tctgaaggactccgtgcattcgcattacttggcgaagggcaaaacgggatggggggtggt agctgcggtcaagagaacggaaatggtcagggttatcagtttcaagaaatatcttcacat gtcatgactatcagtggtggtgcagtaacttcaatcgcgttcttgccacgagatgttgga ataggggaggaacaattgattgcgagtggggataaccaggggttcgtcggtatctacgac atacaaaatggaaggcttcatgcgaaaatggcagtccctcatccacccggaattcccccc gtaggagtcagtgctgtcctgtgtttgaatcgcccatcccctgctgctatggatagttat ccttctttcggcaacagtcgctctgctctcattctggccggtgcatatgatggacgggtg gcgattttcaaatctgaacctcatgggccaaaatatcgagtcatgagtacgttccagagc tcaggacaatcatactggagcaaagttggaactataagggagcccgaaaaaaaaccgaaa cgacatgacgttatgggaggaacgtatcactcatcggacagtatggaatcgctagactcc tatgacatgacttttgcgaaaaccgtgaaagactcaggcaacgggcttgttctcgctttt gattccgaatcctcctacctggtagctggaggttgtgatggggaagctgtccgtgtttgg gatcttgcgagggagtattgtatctgggaaggtgcaggtgtagcaaccggaacgtggccc accgcagtgacgatgtggggtagaattaatccgaaagtgtttgtcacgggttcatcagac gggactataagcattatcgacatacggagcgggcctgcttttgcgggaccccccgtccag ctaacgcatttcggtgaacaaaagcaccccatcatttctcttggcacgtactcacctttc agtggctctccctgtgagactgtagtctctgcagacataggaggggaaattgcgttttgg gactcgcggctgtcaaggaacagtcctgctccactagcaatggaaaccccacctagtttg agccacatcaaagcgcacagaaacaaccttacgtgcatgtccgttcaccctgcaggaacc ctcattgcgtccgggtcaactgctaggtgtgtaaagatctttggcccaaaccgggctatg ctaaagatgatgtctgctcatgaccgagattctgggcatgatctcactggtgatgatcct cttgtgccccctgttacatgcctcagctttcaaccagattccaatatgcttgccatcggg tcattggaaagcacggtcatggtgtatggacaaccagatacatttccgggagtatatgca caagaagacgagattcaacaagcgaagcgggctgtattatctgagtatgggaactga

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