Chondrus crispus (carragheen): CHC_T00006440001
Help
Entry
CHC_T00006440001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_LRRK2
Atx10homo_assoc
ZER1-like_2nd
Arm_4
TPR_TNPO3_IPO13_4th
CTNNBL
Motif
Other DBs
NCBI-GeneID:
17326249
NCBI-ProteinID:
XP_005718540
UniProt:
R7QMM1
LinkDB
All DBs
AA seq
1369 aa
AA seq
DB search
MPSVVERAEKLQHSAVEPLQQAMGKKVEDPGVVVPDLSVAQIRTSGMSPNPANAESFQVS
TSELHAVRQEATEKIAEDVHSPTLLGGSSSSATRGEIVNTTTEVAAVSKGQTVEKLIDDA
DASDDQFLTPPEQSEESEKHGSSSVAKRVVGAIGVASAGTAAAFGIGKSDQAAADSRLRS
SSDGARTTVAGLIPNVRGTADETGDSSPVQEAQQTGLNDMASSTDAGNYSGYLSPPSVET
RTRMFEETAAAAAAETGALARGKSYSLNGADGAPANQQTLSHLDEFEQADMRKMTSDGIS
SNPTYASSATVGCKITRASTFAREASNSQENVATPYVTQRAVGAGLRQVPESRFSSEIQG
LPQESRSALMKKGSGFIDEPITQQPIEEVLDLYPKNPLRSDSQVPLFRILEAIQNIPADD
SEAYGILDQYHGFSKVIVAMLSQFEDGALQEQGLHCIVRILRNTQSSRKEVLVLNSYGDC
YRTVQGTADAVVPKGNPDIDVRSSGAVQAVVQALHNFESMRRVQLAGCAALAEIGSISTP
CKLLACEYGAISLINNALRHRSTQAASSIHDIASRAVSAFCSGKENLSYKQSFTKTGTEK
ELLNVLQLWGLAEGNTSELLTTATKSCCSALRHLTDGCPTAGVQCVQAYGYHHLIRAMAV
RRDDVAVCTLVVSAMTSITRSSGSAAEKGLQDSKPLREVLITMQAHSDQPLFIRKCLDFM
DALGCYSSMREEIVAAGGIPFAADIIEQGGNDSLLLERSCGVLEKLCRSHARNQEILASH
NGISSLTALLTTHQGLPGVIEKDLLALSSVCASNGKTQKEALKSGTPEQVVRSLGLYSAQ
NSKVAAAAAATMAAMVVPRNTAMSQSFAKLKAPELVVRAMKRHPDSVMVQENGSAAISSF
CEADPRIISMILKSGISSLLVVALQRYLHKQTAVVQIVRAMRAISNEASEDSYRFKSKLL
TDRSNESSLSEVFHTALSYHKKSLPDTANVIISICATINRLCMRSVAFKNEIGKDGIVEE
LKRLVERTAEYRELGALQPVLATICTLVLDSEDNKNRFHAVGGVEVILDVMQKWKSDTYV
LEHCCAALRYSCNEHFGNCDEVKRHNGVRSILGVMELHPENVNVTLWCCLTLADLCKGDE
ELQSSPNVVQGIRKVVSAMTTFSGNSRFLASACEFLRAASIENDENQERIVRLGGRTAIV
RALESHPSDSSLTETAAYALLLLQDVQDARISADGDSQIGFVKRLSRDLRRSSSSNRSTR
SGRGLFGLKSRSFISKRKSTEQIEDDVRLSEAAGAEAAPDRLPASRPSLISFSRRSKGSR
RSRRNYIEEVEDDVDDVDDVEQFADGADNGYGEYGPAPVPLTASGPHVE
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgtcgtggaacgtgcagagaagcttcagcacagcgcggtggaaccgttgcag
caggccatgggaaagaaggtggaggatcccggcgtcgtcgttccagatttgagcgttgcc
caaatccgtacatcaggcatgagcccaaatccagcgaacgccgagagcttccaagtctcg
acgtccgaactacatgccgtccgccaggaggccaccgagaagattgcagaagatgtgcac
agtccgactttgttggggggtagttcttctagcgctacgcgaggggaaatcgtcaatact
actactgaggttgctgccgtgtcaaagggacaaaccgtagagaaattgattgacgacgcc
gatgccagtgacgaccagtttctgaccccaccggaacaaagtgaagaaagtgagaagcac
gggtcttccagcgtcgcgaaacgcgttgtcggtgccatcggggttgcgtcagctggcacc
gctgctgccttcggtatcggtaagtctgatcaggcagcagcggactcccgcttgcgttca
tcaagtgacggagccaggactacagttgcgggcttgattccaaatgtgcggggcaccgca
gatgaaaccggcgattcgagtcccgtgcaggaggcccagcaaacgggcctgaatgatatg
gcttcatctactgatgccggcaactacagcgggtatctctcccctccttcggttgagacg
cgcactaggatgttcgaggaaacagcagcagccgcagcagcagagacgggggctttggca
agagggaaatcttattccctaaatggagcagacggggctcctgcgaatcagcaaactctg
tctcatcttgatgaatttgaacaggctgacatgcgcaaaatgacatctgacggcatcagc
tccaatcctacatatgcctcttcagccactgtggggtgcaagataacaagagcatccaca
tttgcgagagaagcgagcaattcacaagaaaacgtagcaacaccctatgtgactcaacga
gctgttggggcgggcttgaggcaggtgccagaatccagattttcgagtgagattcagggt
ttacctcaggaatctcgttctgctctaatgaaaaaaggcagtggtttcatagatgagccc
atcactcagcaaccgatagaagaagtgcttgacctatatccgaagaacccgctgaggtct
gattcgcaggtgccactcttccggattcttgaagctattcagaacatacctgcagatgac
tcagaagcgtacggtattttagaccagtatcatgggttttcgaaagtgattgtcgcaatg
ttgtcccagttcgaagatggagcgctgcaggaacaaggcttacattgcattgttcgcatt
ctacgcaacactcaatcatctcggaaggaagtactggtactgaactcctacggagactgc
tacagaacggtacaaggaactgcggatgctgtggtgcccaagggcaaccctgacattgac
gtgcgttcttctggcgccgtgcaagcggttgtgcaagctctgcacaattttgagtcaatg
cgcagggtgcaattggctggatgtgcggcattagctgagattggatctatatctacaccg
tgcaagcttcttgcctgcgaatacggggcgatatcactaatcaacaacgctttgcgccat
cgaagtactcaggcggcaagcagtattcacgatattgcctcgcgggctgtgagtgccttc
tgctcgggaaaagaaaatcttagctacaagcagtcctttaccaagactggaacggagaag
gagcttctgaacgtcttgcaactatggggacttgcagaggggaatacttcagagcttttg
accacagcgacgaagagttgttgttcagctttgcgtcacttgacagatggatgtcctact
gccggggtccaatgtgtacaagcttacgggtatcaccaccttatcagagcaatggcagta
cggcgagatgacgtcgccgtatgcacattggtagtctctgcaatgacatcaattaccaga
agttctggctcagcagccgaaaagggtctccaggactcaaaacctctccgcgaagttctg
atcaccatgcaagctcattcggaccagccgctgttcatacggaagtgcctcgacttcatg
gacgccttgggatgttacagcagtatgagggaagaaattgtcgcggcaggcggaattccg
tttgctgcagatatcatagagcaagggggcaacgactcactgctgctggagcgctcctgc
ggtgttttggaaaaactttgccgatcgcacgcgcgcaatcaggaaattttggcttctcac
aacgggatctcgtccctgacggctttactcacgactcatcaaggacttcctggcgtcatc
gaaaaggatctgttggcgcttagcagtgtctgcgccagcaatgggaagactcaaaaggag
gcgctgaagtcaggcaccccggagcaggtcgtgcgttcgcttggactctactcagctcaa
aactctaaagttgcagcagcagcggcagcgaccatggccgccatggtagttccgagaaac
acagccatgtctcagagttttgccaagttgaaagctccagagctcgttgtgagggccatg
aaacgccatcccgacagcgtgatggtgcaggagaacggcagtgcagcgatatcatctttc
tgtgaggccgatccacggattatttcgatgattttgaaatcgggaatatccagccttctt
gtcgttgccttgcagcgctatctgcacaagcagacggcagtggtacagatcgtgcgggcg
atgcgagccatctcgaacgaagcttcggaagattcgtaccgattcaagtccaagttgcta
actgacagatcaaacgaatcttctttgtcagaagttttccacaccgccctttcttatcac
aagaaatcgctgccagacacagccaatgtaattattagcatttgtgcaaccatcaaccgg
ttgtgtatgagatcagtagccttcaagaacgaaattggaaaggatggcattgttgaggag
ttgaagaggttggttgaaagaacagccgagtatagagaattgggagctttgcaacctgta
ttggccacaatttgcacgcttgtgttagactcggaagacaacaagaatagattccatgca
gtcggcggagtggaagtgatactggatgtcatgcagaaatggaagagcgacacatatgtc
ttggagcattgttgtgcagcattacgctactcttgcaacgaacactttggaaattgtgac
gaagttaaacgacacaacggtgtacggagcattttgggcgtgatggagcttcaccctgaa
aatgttaatgttaccttatggtgctgcctcacacttgcagacttgtgtaagggagacgaa
gaactacagtcctccccaaatgttgtacaaggtatccgcaaggtggttagcgcgatgaca
accttctccggcaacagcagatttttggcaagtgcgtgtgaatttctgcgagcggcttcg
atagagaacgacgaaaatcaggagcgaattgtcaggcttggcggccgaacagcgattgtg
agagcattagaatctcacccaagtgatagctcacttaccgaaactgcggcttacgcactg
ttgctgctccaggatgtacaagatgctcggatttctgccgatggcgattctcaaatcggc
ttcgtaaagcggcttagccgagatcttcggcgttcctccagctcaaaccggtccactcgc
tctggacggggactttttggactgaagtcgcggtcgtttatctcgaagcgcaagtcaact
gagcaaattgaagacgacgtacgtctgagcgaagctgccggggcggaggcagcacctgat
cgcctgccggcaagtcgaccttcgttgataagtttttctcgtcgatcgaagggttcgcgc
aggagccgacgaaactacattgaagaagtagaggatgatgtcgatgatgtcgatgatgtc
gaacagttcgcagacggagctgacaacggctacggggaatatggtccagccccggtgcct
ctcaccgcttctggtcctcatgtggagtag
DBGET
integrated database retrieval system
