Chondrus crispus (carragheen): CHC_T00006659001
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Entry
CHC_T00006659001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHC_T00006659001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccp03021
]
CHC_T00006659001
Transcription machinery [BR:
ccp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CHC_T00006659001
Prokaryotic type
Archaeal type
TFB
CHC_T00006659001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
OpuAC
Ribosomal_S27e
Zn_ribbon_PaaD
TPR-S
Pox_TAA1
Motif
Other DBs
NCBI-GeneID:
17317593
NCBI-ProteinID:
XP_005709868
UniProt:
R7QNA6
LinkDB
All DBs
AA seq
328 aa
AA seq
DB search
MERELPEECPECESDDIIEDWAHGNAVCRSCGLVVQDRLLDLGTEWRTFTAEEGDDPNRA
GPAANPLLEGEQGTSIGNGARGGGQLNKALNRAQQRNAISDADKVMIAVMGRIDRFCERL
SLTGSISKRAKELFKRYRDHLTLKKTASNPDVFTRSRPLRDEEVSEIIASSLFIACRNEK
AARTYKEICGLTKVPKKNVGATVKKMELVLEGAKTTYVRGTDDFVTRFCNLLDLPRDVIN
AADAVANALQNQEGVYGKTYTTVAASSIYVVTQLSDDKHVRTAKEIADVTGVADVTIKTT
YRLIYPYIKKVLPKDFKPAKPLSRLPPP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgagctgccggaagagtgccccgagtgcgaaagcgacgacatcatcgaggac
tgggcccacgggaacgccgtctgtcgctcctgcggcctcgtcgtccaggaccgtttgctc
gacctcggcaccgagtggcgcaccttcaccgctgaggaaggcgacgaccccaaccgcgcc
ggacccgcggctaacccccttctagagggcgagcaggggaccagtattgggaatggtgct
aggggaggggggcagcttaataaggcactcaatcgtgctcagcagagaaatgccatatct
gacgccgataaagtcatgattgccgtcatgggtaggattgataggttctgcgagcgtctt
tcattgacggggtccatctcgaagagggcaaaggaattgtttaagaggtaccgcgaccat
ttgaccctcaagaagaccgcgtccaatccggatgtcttcacgagatcccgcccgttgcga
gatgaggaagtcagcgagattattgcctccagcttattcattgcatgtaggaatgagaag
gccgcgcgtacgtataaggagatctgcggcttgacaaaggtcccgaagaagaacgtgggc
gccacggtcaagaagatggagctcgtgctggagggcgcgaagaccacctacgtcaggggg
actgatgactttgttactcgattctgcaatctcctcgacttgccgagggatgttattaat
gccgccgatgccgtcgccaacgcgctacagaaccaggagggcgtatacgggaagacgtac
accaccgtcgccgcttcctcgatttatgttgtcacccagctcagcgacgataagcacgta
cgcacggcgaaggagatcgccgacgttacgggcgtggccgatgtcaccatcaagaccacg
taccgcctcatctatccttatattaagaaagtcctgcccaaggatttcaagcctgcaaaa
ccgctgtcgcgacttccgccgccctaa
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