Chondrus crispus (carragheen): CHC_T00006824001
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Entry
CHC_T00006824001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHC_T00006824001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccp02000
]
CHC_T00006824001
Transporters [BR:
ccp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
CHC_T00006824001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
Zeta_toxin
AAA_29
ABC_ATPase
AAA_16
SbcC_Walker_B
AAA_25
P-loop_TraG
DUF7053
nSTAND3
Motif
Other DBs
NCBI-GeneID:
17317653
NCBI-ProteinID:
XP_005709942
UniProt:
R7QPE9
LinkDB
All DBs
AA seq
679 aa
AA seq
DB search
MKWSHHATGRALQSSAFVQSVPRGVALRNSAIRESCFVQKRFAHVRKRRRAFIVASVATS
GTTKIHQQDVQALIPLQAAKPRPELRFLQLLWQNWRILVPALVAALVASCCAVVQPVLLG
RIIAVLARAETLPQTVARSSLLRKAGGLVIVYCIELTCTITFVSLVTRSIDRSLRQLRET
LFRKTLRNDLGFFDNIGRFEIEKTISKDISIVRDSIWGNLSRDRGLRAMLEIFLGLALCL
SITGVVGAPIFGGLVPVVATLVAQMGLRNGRLASAVFAKDSTIQSYLNERLRGVRLVKAF
GAEKREQRDLGNLLDNAEVDSNKFGVSKAMTEGANRVGIYFTIMTYFVLGGLMICAGKIT
YETFACLTGFIWILNFAMQGVSYTITDAAKAGASLKSIYALLDQANAFGRAQKLINSSGS
PQTKLKGEIQFHDVSFHYPSRPEASVLQGVNFSIRPGQMIALVGDSGGGKSTIAAMVTRF
YAPTSGSVTVDGIDLQSLPNKVYSRYCSLVDQDPILFQGSIKENIAYGLPDEDVSDEEVI
RAATEANAHEFIVKLKDGYDTIWSPESNISGGQRQRIAIARSLVKSPRILVLDEATSALD
QESERIVQNALERVMKNRTVLIIAHRLSTVRTADKILFVKDGQIVEEGTYDQLCAKKGGY
FQTLVHSATELVGNATSSI
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtctcatcatgcgacgggaagagcccttcagtccagcgcgttcgtgcagagt
gttccgagaggtgttgcattgcggaattctgcaatcagggaatcctgttttgtccaaaaa
cggtttgcacacgttcgaaagaggcgaagggcttttatagtggcatctgtggcaacaagt
ggtaccacgaagatacatcagcaggatgttcaagcgttgattcctctccaggctgcaaaa
ccacgccctgaacttcgcttcctgcaactgctgtggcaaaactggagaatactggtgcct
gctctagttgctgcattagtggccagttgctgcgctgtcgttcaacctgtgcttctcggg
cgaattatcgccgtattagctcgagcagagacgctcccgcagaccgtcgcaaggtccagt
ctacttcgaaaagcaggaggcctggtcattgtttactgtatcgaactaacatgtacaatc
acttttgtatcattagtgacacgaagcatcgacagatcattgcggcaactacgcgaaacc
ctctttaggaagaccctgcgcaatgatcttgggttcttcgacaatatcggtcgctttgaa
attgagaaaaccatttcgaaagacatcagtatcgtgagggacagtatttgggggaatctt
agccgggaccgcggtcttcgcgctatgttagagatattcctcggtctcgccttatgtctt
tctattaccggcgttgtgggcgcaccgatatttggcggtctggttccggtggtagcaacc
cttgtcgctcaaatggggctgcgaaacggtcgactggcatccgctgtgtttgctaaagac
tcaacaatccagtcgtatttaaacgaaaggctgcgcggagtcagattagtcaaagcgttt
ggtgccgaaaaacgggaacaacgagatcttggcaatctccttgacaatgctgaggtcgat
tcaaacaagtttggtgtgagtaaggcgatgactgaaggggcaaatagagtcggcatatac
tttactatcatgacatattttgtgttgggaggtctcatgatttgtgccgggaagataact
tacgaaactttcgcgtgcttgacaggattcatctggattttgaatttcgcaatgcagggt
gtctcctatacgatcacagacgccgcgaaagccggagcgtcgttgaaaagcatatacgcc
cttttggatcaagcgaacgctttcggcagagcgcagaagctcattaactcttcaggttct
ccgcaaaccaagttgaaaggtgaaattcagttccatgatgtcagtttccactatcccagt
agacctgaagcttccgtactgcagggtgtgaatttctcaattcgacctggacagatgatt
gcccttgtgggtgattcgggtggggggaagtctacgatcgcagccatggtgacaaggttt
tacgccccaacgtctgggtcggtaacagtggatggcatagaccttcaatcgttgccgaac
aaagtatattctcggtactgctcgctcgttgaccaagaccctattctcttccaaggctcc
atcaaggagaacatcgcttacggacttccagatgaagatgtcagtgatgaagaggtcatt
cgtgcggccactgaagcgaacgcccatgaattcatcgtgaaactaaaagacggatacgac
acaatttggagcccagaatccaatatctccggcggtcagcggcagcgcatagcaattgcg
agaagtttagtgaagtcaccacgtattctcgtcctagatgaggcaacttccgccttagac
caagagagcgagcgtattgtccagaacgcccttgaaagagtgatgaagaaccgcacagtg
ctcatcattgcacacagattgagtacggtgcgaacagcggacaaaattcttttcgtcaaa
gacggtcaaattgtcgaagagggtacctacgaccagctgtgtgcaaagaagggtgggtat
tttcaaaccctagtgcattccgctacggaactggtgggaaacgcaacctcgtctatttag
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