Chondrus crispus (carragheen): CHC_T00006851001
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Entry
CHC_T00006851001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00900
Terpenoid backbone biosynthesis
ccp01100
Metabolic pathways
ccp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CHC_T00006851001
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccp01006
]
CHC_T00006851001
Enzymes [BR:
ccp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CHC_T00006851001
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CHC_T00006851001
2.5.1.29 geranylgeranyl diphosphate synthase
CHC_T00006851001
Prenyltransferases [BR:
ccp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CHC_T00006851001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
G7C_GBD
Motif
Other DBs
NCBI-GeneID:
17317867
NCBI-ProteinID:
XP_005710166
UniProt:
R7QMY9
LinkDB
All DBs
AA seq
265 aa
AA seq
DB search
MRYSLLAGGKRVRPILAIAAFQMFAQGGAQAALEPVMPTALAVEMIHTMSLIHDDLPAMD
DDDFRRGKPTNHMVYGEDIAILAGDAMLSYAFEYVARETRDVDPVRVLEVIRLLSNCVGP
EGLAGGQVMDLESEGKTDVSLETLTWIHTHKTAALLRVSCAGGAVIGGASEDDVQRVSDF
AVKIGLAFQIADDVLDVTQSTEMLGKTAGKDEATNKATYPRLLGLEGSRQQAERLVAEAK
ECLAPYGERSKNLLALADFIINRSN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcgctactcgctgctggccggcggcaagagggtccggcccatcctggccatcgccgcg
ttccagatgttcgcgcagggcggcgcgcaggcagcgctggagccggtcatgccgaccgcg
ctcgcagtcgagatgatacataccatgagcttgattcatgacgacttgcccgccatggat
gacgacgactttcggaggggcaagcccacgaatcatatggtgtatggcgaagatatcgcc
attctggcgggtgatgccatgttgtcctacgcttttgagtacgtggcgagggagacgcgc
gacgtggacccggttagggtcttggaggttatcaggttgttgagcaattgcgtggggccc
gagggcctggctggggggcaggtcatggacttggagagcgagggcaagaccgatgtgtct
ttggaaaccctcacctggatacatacccacaagaccgccgctttgttgcgagttagctgc
gccgggggcgccgttattgggggtgcgagtgaggacgatgtccagcgtgtcagcgacttt
gctgtcaagataggcctcgcctttcagattgcggacgatgtcctcgatgtcacccagagt
accgaaatgctagggaagaccgcagggaaggacgaggccaccaataaggcaacctacccc
aggttgttaggcttggagggatcccgccagcaggcggagaggttggtcgcagaggcaaaa
gagtgcctcgccccgtatggggaacgctcaaagaacctgcttgctcttgcagattttatc
atcaacagaagcaactga
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