Chondrus crispus (carragheen): CHC_T00006981001
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Entry
CHC_T00006981001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K11088
small nuclear ribonucleoprotein D3
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHC_T00006981001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00006981001
03041 Spliceosome [BR:
ccp03041
]
CHC_T00006981001
03032 DNA replication proteins [BR:
ccp03032
]
CHC_T00006981001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CHC_T00006981001
Spliceosome [BR:
ccp03041
]
Complex A
U1 snRNP components
Sm proteins
CHC_T00006981001
U2 snRNP components
CHC_T00006981001
Complex B
U1 snRNP components
CHC_T00006981001
U4/U6.U5 tri-snRNP components
CHC_T00006981001
Complex C
U2 snRNP components
CHC_T00006981001
DNA replication proteins [BR:
ccp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CHC_T00006981001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
17318139
NCBI-ProteinID:
XP_005710402
UniProt:
R7QQT6
LinkDB
All DBs
AA seq
122 aa
AA seq
DB search
MSVGIPIKLLHEASPHVVTVELHVGDVYRGTLSSVEDNMNVQLRRVTLTARDGKVSNLEN
VFIRGSKIRYFILPDILASAPMFKRARGLGRGRGMPGAARGRGAPPAARGRPARPPAPRG
GR
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagggatccccatcaagctgctgcacgaggcgtccccgcacgtggtcacggtc
gagcttcacgtgggcgacgtgtaccgcggcaccctgtcgtccgtggaggacaacatgaac
gtgcagctgcgccgcgtcacgctcaccgcgcgcgacgggaaggtgtccaacctcgagaac
gtcttcatccgcggctccaagatccgctacttcatcctcccggacatcctcgccagcgcc
cccatgttcaagagggcccgcggcctcggacgcggcaggggcatgccgggagccgcgaga
ggcaggggagcaccgcccgccgcaaggggcaggcccgctagaccccccgcgcctagaggc
ggccgctga
DBGET
integrated database retrieval system
