Chondrus crispus (carragheen): CHC_T00006987001
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Entry
CHC_T00006987001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccp04131
]
CHC_T00006987001
Membrane trafficking [BR:
ccp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
CHC_T00006987001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
17318123
NCBI-ProteinID:
XP_005710408
UniProt:
R7QPS8
LinkDB
All DBs
AA seq
1064 aa
AA seq
DB search
MLATVGLQDGDVEQYYIGVPAGDRCPVMRRLSLSGWYFEPTDVGAAVVVRWTDDGAALVV
GWEKRGLAVWSVSGCRLMWTLPQVGGTLPTTPASRNKDSKSHAVVHPMEQGVLAAAWGSN
GLFLWAAPRVTEETPEPILDCHFMEFAIYKGSVGSHFCQGESSRLAMFGSDRVLLLWHAD
GSDEATGQQGSAAWNDLFSWQHLLIPHDYLWRNWPPKRIAVNADASFVAVAGEYGVAMCH
VRTQKWRVFGDLEHDRRIRCCALAWVSKTIVIGNEVTNGTSRSRYKSTYELLFYPRDQVE
SSALQAQIQLPSRPVLTDVRADGYLLVICENAQVFLYQMKEVPHRTRIDLKEVYRIFLPT
RELIPMYQQDRQTKVGKPFSGDDEDSAPPPAPGGGISEARIFPPLTHAPGGLNDQQAPPP
TYIMLLRSTGSLILLDTERMVSTALLRYVERFWYTPVDCTPFDMISHRPVWWAYGDDGLH
VCFQDGLSIENDLDEPLIGVPDSPPLPFTSKKKAVEVEQWFELDPEVYPLSIMSRYGMLL
GATQGLVTHNLDSESGSMPCHVIQVKRQPILHTLLRHLLMKPMSDERTALQVALKCVPQP
QFADSLEWLLYEAVLEHDEDANVNINARSILAVTDGRGMHPKRQYGPGSTHLTSSKGFPE
SPRRRKAGGDLFPRVIRLLKYFGEYEDVVVRCARKLDSKRWPLLFSLAGEPAALLEQCFV
SGRLRTAACLLVILQEMWGFISSTPHSLRLVEAALARGELSLAADLANFLTKADRAGMLN
SSQLRTTEDVSWIAEAVQAPQAGALSRLPKRKQPKDGPADRIPAVDLAVLNHARSLLNHM
DLRNLAALAVRMDFPLSEYLKRELKGKSASKPFVRDVGNTLLSLHRQFQIPAPTTHDVRR
AMRVFNHEVDVAKGRSSSMDSTSSHHNGLAPTPTLDEMQPLVTPRSLAIKASVSLVGPGA
DTVFGSQLPPPPTSYDSERLVNIRTKARQLSREELSYVMTVARVARAPDIILCCATLLLD
ITVLRMVLRGHEDLFEPYVAAVKEFDEPGYDALVAVLNEIAVPR
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccaccgttggattgcaggatggcgatgttgagcaatactacatcggcgtcccg
gccggtgatcgctgcccggtcatgcgccgactcagcttgtcgggttggtatttcgaaccc
accgatgtcggagctgccgtcgtcgtccgatggactgatgatggtgcggccctggttgtg
ggctgggagaagcgcgggctcgctgtgtggtccgtttctggttgccgcttgatgtggacg
ttaccgcaagttggaggcactttgccgaccaccccggcctcgaggaacaaggatagcaag
agtcatgcagtcgtccatcccatggaacaaggtgtgcttgccgccgcatggggctctaac
ggtttgttcttgtgggcagcacccagggtcacggaggaaactcccgaaccgatacttgat
tgtcattttatggagtttgccatttacaagggtagcgttgggagtcatttttgtcagggt
gaatcatcgcgtctcgccatgttcggttcggatcgcgtcctgctgctctggcatgccgac
ggatcagacgaggccactgggcaacaaggaagcgcagcgtggaacgatttgttttcgtgg
caacacttgctcattcctcatgattacctctggcgcaattggccaccaaaacggatcgcg
gtcaacgcagatgcatctttcgttgctgtcgcaggcgagtatggcgttgctatgtgtcat
gtgcgaacgcaaaaatggcgcgtgtttggtgatcttgagcacgatcgaaggatcagatgt
tgtgcgcttgcatgggtcagcaagaccatcgtcatcggcaacgaagtcaccaatggaact
agccgaagcaggtacaaatcgacatatgaattgctcttttacccacgcgaccaagttgag
tcgagcgctctgcaagcccaaatacagctcccgtcacgtccggtgctcacagatgtgcga
gctgatggatatctgttggtcatatgtgagaacgcgcaggtgttcttgtaccaaatgaag
gaggttcctcaccgaacaagaatcgatctgaaggaagtttacagaattttccttcccaca
cgcgaattgattccgatgtaccagcaagatcgacagaccaaggtgggaaagcctttttcg
ggagacgatgaagattctgcgccacctcccgcgccgggtggaggaataagcgaagcaaga
atattcccgcctctaactcacgccccaggaggactaaatgatcagcaagccccaccgcca
acatacataatgttattgcgaagcacggggtcccttattttgcttgacactgaacggatg
gtatcgacagctctcttgcgatacgttgagcgtttctggtacactccagtggattgcacg
ccattcgatatgatatcgcatcggcccgtgtggtgggcatacggagatgacgggcttcat
gtttgcttccaagacggcttgtcaatcgaaaacgacttggatgaaccacttattggagtc
cctgattcgcccccgcttccattcacatctaagaagaaagcagtggaagtcgagcagtgg
tttgagcttgaccctgaagtgtaccccctctccataatgtcaagatatggaatgcttctt
ggcgcgactcaaggtctagtgacgcataaccttgattctgagtctggttcaatgccctgt
catgtcattcaggtaaagcggcagccgatactgcatactctgcttcggcatttgcttatg
aagccaatgagtgacgaaaggacagctttacaagtagcattgaagtgcgtgccacaacca
cagtttgctgattcacttgagtggcttttgtacgaagctgttctcgaacatgatgaagat
gcgaacgtcaatattaatgctagaagcattctagctgtcacggacggtagaggcatgcat
ccaaagcggcagtacggacccggctcaacacacctaacgagcagtaagggctttccggaa
tcacctcgaagaagaaaagcgggaggtgatctcttccctagagttattcggcttctgaaa
tactttggggagtatgaggacgtggtggtgaggtgtgccagaaagcttgattcgaagcgg
tggcctcttctattttctcttgcaggtgaaccggctgcgttgcttgagcaatgttttgtg
tctggacgcttgcgaactgcagcatgtctgttggtgatcctacaggaaatgtggggcttt
atatcttcgacgccacactcgttgcggttagttgaagcagccttggcccggggagaattg
agtttagcggctgatctcgccaactttctaacaaaggcagatagagcggggatgttaaat
tcttctcagttgcgaacaaccgaagacgtttcttggattgcggaagcagtccaagcacct
caggccggggctctcagccgcctgccgaagcgaaagcaacccaaggacggtcctgctgat
cgaatacctgccgtggacttggcagtcctaaatcatgcaagatcattgctgaaccatatg
gatctgagaaacttggcggctctagcggtgcgaatggattttcctctctctgaatatcta
aagagggagttgaagggaaagagcgcaagcaaaccttttgtgcgggacgtggggaataca
cttctttcacttcacagacaatttcagattcccgcgccaaccacgcacgacgtgcggaga
gcgatgcgagtcttcaaccacgaggtggatgttgcgaagggccggagttcgtccatggac
tcaacatcaagtcaccataatggcctggcaccaacgccgacgctggatgagatgcagccg
ttagtcacaccgagatctctggccataaaggcaagtgtgtcactcgttggccccggagca
gatactgtcttcggctctcagctaccgcctccaccgacttcgtatgacagtgagcgcctt
gtgaacattcgaacaaaagcgcggcagctatccagagaagagctatcatatgtgatgaca
gttgccagagttgctcgtgcacccgatataatattatgctgcgcgacactgctgttggat
ataactgtgctacgaatggtgctacgcggtcacgaggatttgttcgagccgtatgtcgca
gcagtgaaggagtttgacgaacctggatatgatgctctagtcgcagttttgaatgagatc
gctgtcccgaggtag
DBGET
integrated database retrieval system
