KEGG   Chondrus crispus (carragheen): CHC_T00007205001
Entry
CHC_T00007205001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03030  DNA replication
ccp03410  Base excision repair
ccp03420  Nucleotide excision repair
ccp03430  Mismatch repair
ccp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHC_T00007205001
   03410 Base excision repair
    CHC_T00007205001
   03420 Nucleotide excision repair
    CHC_T00007205001
   03430 Mismatch repair
    CHC_T00007205001
   03440 Homologous recombination
    CHC_T00007205001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccp03032]
    CHC_T00007205001
   03400 DNA repair and recombination proteins [BR:ccp03400]
    CHC_T00007205001
Enzymes [BR:ccp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CHC_T00007205001
DNA replication proteins [BR:ccp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    CHC_T00007205001
DNA repair and recombination proteins [BR:ccp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      CHC_T00007205001
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     CHC_T00007205001
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol divDNApol POL3_N DNA_pol_B_2
Other DBs
NCBI-GeneID: 17318475
NCBI-ProteinID: XP_005710748
UniProt: R7QQQ5
LinkDB
AA seq 971 aa
MFGLTEGGSSVLVRVHHFYHYFYLPVTDGIQPEALAEAINRRLWNDKTVPRDRTVVTNVE
ITTKRSIMYFIPGDPEVKFYKITLLNPRHTKDVARILQRGGLSVKKPNDVTAKLPELPTF
ESTLDYLLRFMIEVGLVGCSWLTLPAGKYTITEHKKSLLQVEIDVHANDIIAHNPEGKWL
RTAPLRRLSFDIECAGRKGIFPEPEHDKVIQIANYVWDHGHKKPIAQVVFTLKSCAAIVG
ADVVSYENEEELLSAWARFVRLTDPDILTGYNIVNFDLPYLLDRAAQLKVADFPLLGRMI
GQPTTMRKTRMSSSAFGTHESHAFSMHGRVIFDMLQLITREYKLRSYSLNSVSAEFLGQQ
KEDVHYSIIGDLQRGDEQTRRRLAVYCLKDALLPVRLMDKLMSLTNYMEMARVTGIPLGW
LVSRGHMIKVVSLLHRKSHLVDLLIPDIKRSGPEGGGGDGPQFEGATVIKPEKGYYKDPI
ATLDFASLYPSIIMAHNLCYSTLVRPVHLAHMKPEDLSKSPSGASFVKRSVKKGILTKIL
EELLAARKQAKKDLKAAKDPFLQSVLNGRQLALKISANAVYGFTGASVGKLPCMDISAST
TAYGRQMIDNTRLEVEKRYKGATVIYGDTDSVMIKFGNGKSLEECMRLGEEAAEAISSIF
PKPVKLEFEKCYYPYLLISKKRYAGLLWTNTEKYDKMDCKGIEAVRRDNCRLVANVISSV
LEFLLKKRDLQQAISMVKKVISDLLQNKIDVSLLVVSKSLTKTDYENKQAHVVLAEKLRK
RDPGTAPAIGDRVPYVITKGRKNEPAYSRAEDPLYVLERNIPIDNNYYLENMLRKPLERI
FEPVMKSSVNSLFVGEHTRTISVVTPKKGGMAKYTKVRLKCLGCKAPINEGALCAYCVPK
EAEHYTKNLNTMVKLEKAYSSLWTECQRCMGDICHDVLCSNGDCPIFYRRRKAQIDLNAA
SEKVSRFGLDW
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgtttggtttgaccgagggcgggagctccgtgcttgtcagggtgcaccatttctatcac
tacttctacttgcccgtgaccgatgggattcagcctgaggccctggctgaagccatcaat
cgccgattgtggaatgacaagacagttccgagggacaggactgttgtgacgaatgttgag
attactacaaagcgcagtatcatgtattttattcctggcgacccggaggtcaagttttat
aagatcacacttctcaacccaaggcacacgaaggatgtcgctagaattctgcagcgagga
ggtttatcggtaaagaaacctaatgatgtaactgctaagttgcctgagctgcctactttt
gagagcacattggattacttgttgcgctttatgattgaggttggtctcgtgggatgttcg
tggctcaccttgccggctggaaagtatactattacggagcataagaagtctctgttgcaa
gtggaaatagatgtccatgcgaacgacatcatcgcacacaaccccgaaggaaaatggctg
agaacagcccccttacgtcgcttgtcctttgacattgaatgcgccgggcgaaaagggatc
ttccctgaaccggaacatgacaaagtcattcaaatcgcgaattacgtctgggatcacggc
cacaagaaaccaattgcacaggttgtgttcactcttaagagctgtgcggcaattgttggg
gcggatgttgtttcctatgaaaacgaggaagagcttttgtctgcatgggcacgattcgtc
cggcttacggacccagatatcctcacaggatacaatatagtcaactttgatcttccgtac
ctcctcgatcgcgcagcgcaactcaaagtggctgattttcccctccttggtcgaatgatc
ggccagccaacgaccatgagaaaaacgaggatgagctcctctgctttcgggacacatgaa
tctcatgccttttcaatgcatggccgcgttatttttgacatgcttcaactgatcacaaga
gaatacaaactgagatcctattctttgaattctgtatctgccgagtttctaggccagcaa
aaagaagatgttcactacagtatcattggagacctccaaagaggtgatgaacaaactcga
cggaggcttgccgtttactgtctaaaggatgcgctgttacctgtgagactcatggacaaa
ttgatgtcactgactaactacatggaaatggctcgtgtcactggcattccgttgggctgg
cttgtctcgagaggccacatgatcaaagttgtaagtttgttgcatcgtaagagtcacctt
gtagaccttctcattcctgatattaagcgttcgggccctgaagggggaggtggcgatgga
ccgcagtttgaaggagctaccgtcattaagccagagaagggatactacaaggacccgatc
gccactcttgattttgcgtccctgtatccttcaatcattatggctcacaacctgtgctac
agcacgcttgttcgaccagtccacctagctcatatgaagccagaggacttatcgaagagc
ccatctggggcatcatttgtgaagaggtcagtgaagaaaggcattctgacgaaaatatta
gaagaattattggctgcacggaagcaagctaaaaaagacctcaaagctgcgaaggaccct
ttcctacagtcagttttgaatgggagacagctcgctttgaagatttccgcgaacgctgtc
tacggtttcacaggtgcatctgtcggaaagctgccatgtatggacatttcagcttcaacc
acagcttacggtcgccaaatgattgacaacaccaggttggaagttgaaaaacgttacaag
ggagcgactgtcatttatggtgatacggattctgtaatgattaaatttggtaatggcaag
tctttggaagaatgtatgcgacttggtgaagaagcagcggaagcaatatcgtctatcttt
ccaaaacccgtcaaacttgagtttgaaaaatgttactatccgtacctactgataagtaag
aaacgatatgctggactgctgtggacaaataccgaaaagtacgacaagatggactgcaaa
ggaattgaagctgtaagacgtgataattgcaggcttgtcgcaaatgtcatttcttcagtt
cttgagtttcttctcaagaagagggatcttcaacaagcaatttctatggtgaagaaggtg
atatctgacttgctgcaaaataagattgatgtatctcttcttgtcgtatcgaagtcgttg
acaaagacagactacgagaacaaacaagctcacgttgttctagccgagaaactgcgcaag
agggatcctggaactgctccagctatcggtgatcgtgtcccttacgttattacgaaggga
aggaaaaacgaacctgcatactcacgagctgaggatccgttgtacgttttagagaggaat
atccccattgacaataattactacctcgagaatatgcttcgcaagcccctggaaagaatc
tttgagcctgtaatgaaaagttccgtgaactctttgtttgttggtgagcatacccgcacg
atatccgtggtaacaccgaagaaaggcggaatggcgaagtatacaaaggtgcgccttaaa
tgtttggggtgcaaagcacccatcaacgaaggcgcgctgtgtgcttactgtgtacctaaa
gaagcagagcactacacaaagaacttgaacaccatggtcaaactcgaaaaggcttattcc
tctttgtggactgaatgccagcgatgtatgggcgacatttgtcatgatgttctgtgtagc
aacggagactgcccaatattttatcggcggcgaaaagcacaaattgatctcaatgctgca
agcgaaaaggtctcgcgctttgggcttgactggtga

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