Chondrus crispus (carragheen): CHC_T00007333001
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Entry
CHC_T00007333001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
CHC_T00007333001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccp04990
]
CHC_T00007333001
Domain-containing proteins not elsewhere classified [BR:
ccp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
CHC_T00007333001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Ntox35
Motif
Other DBs
NCBI-GeneID:
17319136
NCBI-ProteinID:
XP_005711404
UniProt:
R7QUT7
LinkDB
All DBs
AA seq
672 aa
AA seq
DB search
MLTAVLARPPKSSETSFLALSGTTPRLTDNPGVLKVCIPFGTENPQRTLISLQRPGPGGA
FLSLSGGKDRARLKNVVSKRELFHLEIVPGTLGKGFVNGPFDHNLPRLTSVEALSHAVLE
LGVRFRLRSAHSRVLRRGDGDQNFVAVVQNGPKTSIQETHEKELLFSGFRVDGAVSGSNG
HMRALFVIKDVESGKVLSVSKSNIAQSRAKTLCESAAALIPEGNAVSPLCVQSRQVWGGI
YLGNVKMRGGDEAGAVQVDEWLMAGPKGRLEVRTNRSSWESFTIEFVRQSFAMAINELPE
SPLYAIASETTRSNIRSEIAARVGKEEPKAASTLGASSKKKKTGGMDYSAALAGLAEPPK
VPVVQKSEGSAAKTSKSASKNASSKAGTKGKGQPAAVSAAAAAAATSALPRNQANRKAAK
RRKKKQKAKNAKRNAAAAHAKGVQAAASGATAGGSKSVDASNTTDKSPDAGKSTVPPDDS
SRSSSKESSQGGSGPPCAACGRMVEGTYTTALGKNFHPHCFCCGKCRRPMGAGAGQFRER
GGIPYCQACYAAHLASRCARCSEPIMDTVITAMEKTWHKACLTCTICRLPLTQTFWLYAD
KPNEPRCSRCVTGSEEYNGRGNASGRMVNLPMFGRNNRPSLPVGNPTAGAGSSAAGGRAR
LMNPVLPATTRR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgttgacagcagtccttgcgcggccgccaaagtcatcagaaacctcatttctagcgctc
tcaggaacaactccgcgccttacagacaacccgggcgtattaaaggtctgtatacctttc
ggtacagagaatccgcaacggaccctgatatcgctacaaaggcctggccctggcggagcg
ttcctcagtctttctggtgggaaagatagggcacgcctgaaaaatgtggtgtcaaaacgt
gaactgtttcatctggaaattgttccaggtacccttgggaaaggctttgtgaacggccct
ttcgaccataatcttccgcggttaaccagcgtggaagcgctctcacacgcagtactagaa
ctcggagtacgttttcgattgagaagcgcccactcccgcgttctgcgcaggggtgatggg
gatcaaaatttcgttgcggtggtacagaatggaccaaagacgtccatacaagagacccat
gaaaaggaactacttttcagtggattccgagtggacggcgcagtgtccgggtcaaacggt
catatgcgagctcttttcgtgatcaaggacgtagagagcgggaaggtcctcagcgtatct
aagtccaatatagctcagagccgcgcaaaaacactctgcgagtctgctgcagctttgatc
ccagaggggaatgctgttagcccactctgtgtgcagtcgcgccaagtttggggtggcatt
tacttaggtaacgtcaagatgcgaggcggtgatgaagcaggtgcagtacaggtcgacgag
tggctcatggcaggtccaaaagggcggcttgaagtgcgcaccaatcggtcgtcttgggaa
tcgtttacaattgagtttgtaagacagtctttcgcgatggctattaacgaattgccagag
tctcctttgtacgcaattgcaagcgagaccacccgttcgaacattcgatcggagattgct
gcaagagtaggtaaagaagaaccgaaggctgctagcactctgggagcatcctctaaaaag
aagaaaacaggaggaatggactattctgcagcactcgcaggactagctgagcctccaaaa
gtgccggtagtgcagaaatcagagggcagtgcggctaaaaccagcaaatctgccagtaaa
aatgccagttcgaaggctggcaccaagggaaaagggcaaccggcagctgtatctgcagcg
gcggcagctgctgctacctcagcgttgcccagaaatcaagcaaatcggaaagcggcaaaa
cgcaggaagaaaaagcaaaaggccaagaacgcaaagcgaaacgcagcagcagcacatgca
aaaggggtgcaggctgctgcgagtggtgcgacagctgggggaagtaagagcgtggacgca
agtaataccacagacaaatctcccgatgcaggcaagtcgactgttccccctgatgactct
tcgcgctcttcatctaaggaaagttcccagggtggctccggaccgccatgcgcagcatgt
ggtcggatggtggagggcacatataccacagccttaggcaagaatttccatcctcattgt
ttttgctgtggaaagtgcagaaggcccatgggggctggggcgggtcagtttagagaacga
ggagggattccttattgccaagcctgttatgcagcgcatcttgcatcacggtgtgcgcgt
tgttcggaaccaatcatggacaccgttatcactgccatggagaagacttggcacaaggct
tgtttgacctgcacgatttgtagattacctttaacccaaaccttctggttgtacgctgac
aaaccaaacgagccacgatgcagcagatgtgtcacgggaagtgaagagtataatggtcgt
ggcaatgcaagtggcagaatggttaacttgccgatgttcggtcgaaacaataggccatcg
cttcctgtcggtaatccgactgcaggagcggggtcgtctgctgccggtggaagagctcga
ttaatgaatccagtgctcccagcaacaacgcgacgatag
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