Chondrus crispus (carragheen): CHC_T00007371001
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Entry
CHC_T00007371001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4200
Motif
Other DBs
NCBI-GeneID:
17318738
NCBI-ProteinID:
XP_005711020
UniProt:
R7QT88
LinkDB
All DBs
AA seq
1377 aa
AA seq
DB search
MAASVVPSRARAGGRLPEPSPGPTPTPSSPTQEPYHVRLILQTDSLRGPALSSSETYVIR
WQRGTRQVKTSRPASISATGNYTAKLSLYVTVRRAGPAFIADNPADPLDSTIQLLQSPDV
APIAETRIDIPGFLQALVQAGRKSLPLSLALAPAVDLGATLTFNTIGGSSLTPYTEPGRP
APMLAGMPPHSALALSDPGEAAAAAELERLRADVREKEGRIDKLADSTDKLDRAVQEQAR
LANGAVPAGDVAALHVRIKYLEEEKASVEREKEEVEKKVAAHVAHAQKIRNTYNQLAGWY
NNLRKEHVELQAKHPSPIGDQTTTDRELPQDVPTTHEAEMRSLERERNELQDLLDRERSE
KKEIHSRNSELLESKARTLVELREQWDVTQNTLSTTQRSKEEQMEKLHVLEQSVTELQAQ
LEIKEAEVSQRSRELADATAATEMAMSQHEHHIQQAVKAAVDEAKAEAERELDEQIKRHK
EAVEQLRIDADSARDTIREKQRSELKAEFDDELERIKKNVQDEQAEMYAEKLSLLHSERD
AIVEEKEENVKKALAEAKESSAATAEARQMWEEKLTRNEKERLALEEKVRDLMQSSAALE
EEKSRSLTTMEEAHRSEVTELQSAKEHVEAELSRAQEALKDEKKVTPNHGDNESVVVAVQ
EELRQAKAEVEALQKENAQMQSSPRDVQVTGSGNHENAAELEREISELRVLLKRESDKKS
EATRLLQNADAEHDELRAMVTRLRSERDEAQQGAKLTKNDVSNPEVGPTASRSASNIENH
LDSCNFLEERDKALREVFRVRKLMKKEISRLKKENDELSRQVENENRTDSEGVERSLTGS
SAPEVSEMKTERDHALAQLQQLRASMNEAKEVRSAELNRAKDNAEASIGALKLEMEAFKD
SAKSREELLEAKIARLDQDLKLEVSSSHELSEKLHRSEASLVEEQSKVHAERLAKEKETT
RLGTLLENLKSQEASLSTELATERGQREEMHRLLSVADTKLAKLETELSHGQESRRENLD
TIRTIAIERDQAQEALKQAEKRLEVSQMRVSDVQQELSEAKEKLQNLESSREYLQKEASE
VGGRNQAVGEEVAVLRADLKQTQVELSKALRDLEIEVQKGSHRAERENASTLELQKQIEA
LTAECNTMQSKYDDKVKAYRAVQESRKNIDLSLNETQASLASLEQAVSEKDEKCHRLEAM
LSDVEMAREQTTSKLKSSNQNESIAKQELERLKAEINSLTKEKAIASENVRELSAMRDQL
SVMHEENVEMVLAERERADRETKRAADLRKEVQSAMLEVDNVRAEMEELQARCSELKKEN
ASLKEVGDERESDLTKRTDDLIGARMSLAYAQEEVVRLRNRLRKLAQSGQGSLSFEQ
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccgtcgtgccctcgcgtgcacgggcggggggtcgcctcccggagcccagc
ccgggccccactcccaccccctctagccccacgcaggagccctaccacgtccgccttatc
ctgcaaacagattccctgcgcggccctgccctgtcttcctccgaaacctatgtcatccgc
tggcagcgcggcactcgccaagtcaagacctcacgccccgcttccatctctgccacgggc
aactacaccgcaaagctctccctttacgttaccgtccgccgcgctggccccgccttcatc
gcagacaaccccgctgacccgttagactccacaatccagcttttgcaatcccccgacgtg
gcccccattgccgagacgcgcatcgacatccccggctttctccaggctctggtccaggcc
ggccgcaagtcgctgcccctctccctcgcactcgccccggcagtcgaccttggtgccacc
ctcaccttcaacactattggcggaagctccctcaccccatacacagagcccggacgccca
gcaccaatgctggccggtatgccaccgcactctgcccttgcgctatctgatcccggtgag
gccgctgcagcggccgagctcgagcgcttgcgtgcggatgtcagggaaaaggaaggcagg
attgataagcttgcagactctaccgacaagctcgaccgcgccgtgcaggagcaagcccgt
ctggccaatggcgctgttccggcgggggacgtcgcggcactgcatgtgcgtatcaaatat
cttgaggaggagaaggcttcggtcgaacgcgagaaggaagaggttgagaagaaggtcgcc
gcacacgttgctcatgcgcaaaagattcgaaacacttacaaccagctcgcaggctggtat
aacaacttgcggaaggagcacgtcgaactccaggcaaagcatccatcgccgataggagac
cagaccaccaccgacagggaacttccacaggatgtgcccaccacacatgaagcagaaatg
cgcagccttgaacgagaacgcaatgagctgcaggacctgcttgaccgcgaacgatcggaa
aagaaggagattcattcacgcaattccgaattgctcgagagcaaggcccgaacgctggtc
gaactgagagaacagtgggacgttactcagaacacactgtccaccacacagaggtctaaa
gaggaacagatggaaaagctgcacgttctagaacagtccgtcacggaattgcaagcccag
ctggaaatcaaagaagcggaagtgtcccagcggtcgagagaacttgccgacgcgactgct
gctacggaaatggccatgagccagcacgaacatcacattcaacaagctgtcaaggctgca
gttgatgaagcaaaagcagaagcggagcgtgagctcgacgagcaaattaaacggcataaa
gaggcagtcgaacaattaagaatagatgcagacagcgctcgagacaccatccgcgagaag
caacgatcggagctcaaagcagagttcgatgacgagttggaacgaatcaaaaagaacgtt
caggacgaacaggcggagatgtatgctgagaaattaagccttcttcacagtgaacgcgat
gcaatcgtagaggaaaaggaagaaaacgtcaaaaaagcgttggcagaggccaaggagtcg
tctgcggcaactgcagaggctagacaaatgtgggaagagaagttgacaagaaatgagaag
gaacggcttgcgcttgaggagaaggtacgagacctgatgcaatcgagtgcggcattagaa
gaagaaaaatcaaggtctttaactacgatggaggaagctcatcggagcgaagtcacggag
cttcagagtgccaaagagcatgtggaggccgaactgtccagagcgcaggaagccctaaaa
gatgagaagaaagtcactcctaaccacggagataacgaaagcgttgtcgttgcagtccag
gaagagttgaggcaagccaaggcggaggtagaagctctgcaaaaggaaaatgcgcaaatg
caatcttcgccaagagacgtgcaagtgactggaagtggaaatcacgaaaatgccgcagag
cttgaacgagaaatttcagaattgcgagttcttctcaaaagagaaagtgacaagaagtca
gaggcgaccaggctgctgcaaaacgcggatgcagagcatgatgagttgcgcgcaatggtg
actagactgcgttcagaacgggatgaagcgcaacaaggagcgaaactaaccaagaacgat
gtctccaatccggaggttggcccgactgcgtcaagaagtgcgtctaacatagaaaatcat
ctcgactcttgcaactttttagaggagagggacaaggcactgagggaagtattcagggta
agaaaattgatgaagaaggaaatcagtcgtctgaagaaggagaatgacgagctaagtcgt
caagtagaaaacgagaaccgcacggacagcgagggtgtagagcgatctcttacgggctcc
agtgcacctgaagtatcagagatgaagactgaaagggaccacgctctggcgcagctgcag
caactgcgggcaagtatgaatgaggcgaaagaagtgcgatcagctgagttgaacagagct
aaagacaatgccgaagcttctataggagctctcaaattggagatggaagctttcaaagat
tctgcgaaatccagagaggagttgcttgaagctaaaattgcaagactcgaccaggacctt
aaactggaggtttcttcatcacatgagctatctgaaaagcttcatcggagtgaggcatcg
ctagtagaagagcaatcaaaggtgcatgcagagcgtctcgcgaaggagaaggaaacgaca
cgtttaggaactcttttagagaatttgaaatcacaggaggcttctttgtccactgagctc
gccactgaaaggggtcagcgcgaagaaatgcaccgtttactctcggtagcagacacaaag
ttggcaaaattagagacagagctttcgcacgggcaagagagccgccgtgaaaacttggat
actataaggactatcgcaatcgaaagagatcaagcgcaggaggcattaaagcaagctgaa
aaacgcctcgaagtgtctcagatgcgtgtctcagatgttcagcaggagctatccgaagca
aaagagaagttacagaatctggaatcttcccgagagtacctccagaaggaggcaagcgaa
gtaggtggtagaaatcaagctgtcggtgaggaagtagccgtgctgcgggcagacctcaag
cagactcaagtggagttaagcaaagcgttgcgggatcttgaaattgaagtgcaaaagggt
tcccatcgtgccgaaagagaaaacgcatctacactagaattgcaaaaacagattgaagcg
ctaacagccgagtgtaataccatgcaatccaagtatgacgataaggtgaaggcgtatcga
gccgtacaagaatcccgcaagaatattgatttgtcgttaaatgaaactcaggctagctta
gccagcctagagcaggctgtatcagagaaagatgagaaatgtcaccggttagaggcaatg
ctgtccgacgtggaaatggcgagggagcagacgacttccaaattgaagtcttctaatcaa
aatgaaagtatagcaaagcaggagctcgagaggctgaaagcagaaatcaattctttaacg
aaagaaaaagccattgcatctgaaaacgtcagagagttaagtgcaatgcgtgaccagctc
agtgtcatgcatgaggagaacgtggagatggtcttagcggaaagagaacgagctgaccgg
gaaacaaaaagggctgcggatttgcggaaggaagtacaaagtgcaatgttagaggttgac
aacgtaagggctgaaatggaagagctgcaagcaaggtgttccgaactgaagaaggagaat
gcatcattgaaggaggttggagatgaacgcgaatcagatttgaccaagcggaccgacgat
ttaattggtgctcgcatgtcacttgcttacgcacaggaagaagttgttcgattgcgaaac
cggttaagaaaacttgcacagagtggtcagggcagcttgtcttttgagcaatag
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