Chondrus crispus (carragheen): CHC_T00007475001
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Entry
CHC_T00007475001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00260
Glycine, serine and threonine metabolism
ccp00290
Valine, leucine and isoleucine biosynthesis
ccp01100
Metabolic pathways
ccp01110
Biosynthesis of secondary metabolites
ccp01200
Carbon metabolism
ccp01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CHC_T00007475001
00290 Valine, leucine and isoleucine biosynthesis
CHC_T00007475001
Enzymes [BR:
ccp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
CHC_T00007475001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
Thr_dehydrat_C
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
17318923
NCBI-ProteinID:
XP_005711211
UniProt:
R7QR03
LinkDB
All DBs
AA seq
1062 aa
AA seq
DB search
MPTVSSARKRSRPVRPAWDCRARGGRGDRRAERGRGARAGGARGPRWSRECVFQVVYESV
SGTSGAGGVRGVATRGARAEEHCGRGSGGDAERGEEHAVACDVCGQAASGGVPVHDAAAA
HRGGASGGARGAAAPDAERGRHPGADRGRARQPRARPRLPAPHRAHARAGVRARHGRRAC
SVRARCASQRARAARAGPLAAPEVHRRQQDGRYRQRRRASQAREQCRRRRRRLPGLRQAR
HRHRCRCGTPLLGGGVVFHPRARVRHRSVRRAAADLPRRAPSQTGGARERAXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTPNPPAP
TLSAPSPLNMSPLPAFLTPIPLPLSLYHRPHTTPTRLPRMTVTQRTPPTPSNYPDPPATD
PPTTDSSTTDTVPVYCYVACSPTRSDYLERVLTSCVYDVVTETPLHRARLLSDRLRNTLH
LKREDTTAVNSFKVRGAYNMMARADPALLRNGVVAASAGNHAQGVALAAQELHVDATIVM
PAVTPDIKVQAVRRRGARAILHGDNFDQAKTRALHLAAEGSKLFVPPFDHPDVIAGQGTV
GLELIRQIAHVDVVFVPVGGGGLIAGIATVLKRLRPHVKIVGVEPEDANAMYESLRKGER
VKLDTVGTFADGVAVIEVGVETFRLCRDLVDEVVLVSTDEICAAIKDVFEDTRSILEPAG
ALAVAGAKKWVARERVTDKQLVAVTSGANTNFDRLRHVSERAEIGEGREGVFAVTIPEKP
GAFRALISALGPEQSITEFNYRYRSNAEAHVFVGMKVASRNDRAMTAIDLTDDEMAKLHI
RHLVGGHVASGDIEEAVFRFEFPERPGALLRFLRKLPDEFNITMFHYRNHGADVGRVLVG
FSSVRKGEEWKKALEEFVEGLGYQCVREDENIAYKLFLGKRS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgccaacggtgtcaagcgccaggaagcgatctcgtcctgtacgtcccgcttgggactgt
cgtgcgcgaggaggacgtggagatcgccgagctgaacgcggacggggagcgcgcgctggt
ggcgcgcgggggccacggtggtcgcgggaatgtgtctttcaagtcgtctacgaatcggtc
tccggaactagcggagccgggggagtccggggagtcgcgacgcgtggagctagagctgaa
gagcattgcggacgtgggtctggtggggatgccgaacgcggggaagagcacgctgttgcg
tgcgatgtctgcggccaagccgcgagtggcggcgtacccgttcacgacgctgcggccgca
catcggggtggtgcgagcggtggagcgcggggtgccgctgcaccggacgctgagcgtggc
cgacatcccggggctgatcgagggcgcgcacgccaaccgcgggctcggccacgccttcct
gcgccacatcgagcgcacgcgcgtgctggtgtacgtgctcgacatgggcggcgagcatgc
agtgtgcgagctcgctgtgcttcgcaaagagctagagctgcacgagccgggcctctcgcg
gcgccggaagtgcatcgtcgccaacaagatggacgttaccggcagcggcgacgcgcttcg
caagctcgtgaacagtgtcggcgacgccgtcgacgtcttcccggcctccgccaagcacgg
caccggcatcgctgccgttgtggaacacctctcctcggcggtggtgtagtctttcaccca
cgcgcgcgcgtacgccacagaagcgtccgccgcgcggccgccgatctcccccgccgcgcg
ccaagtcaaacaggtggcgcgcgagagcgcgcnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaccgaccacccccaacccccccgccccc
acgctctccgctccctcgcctctaaacatgtctccgctgcccgccttcctcactcccatc
cccctccctctctccctgtatcaccgcccgcacaccaccccaacccggctgccgcgcatg
accgtcacccaacgcacgccccccaccccgtcaaactaccccgacccgcccgccacggat
ccgcccaccacagactcatccaccacagataccgtcccggtctactgctacgtagcgtgc
tcccccacgcgctccgactacctggagcgcgtcctcacctcgtgcgtgtacgacgtcgtc
acggagacccccctgcaccgcgcgcgcctgctctcggaccgcctccgcaacacgctgcac
ctgaagcgggaggacaccacggccgttaactcgttcaaagtccgcggcgcgtacaacatg
atggcgcgcgcggatcctgcgctgctgcgcaacggcgtggtcgccgcgtcggcaggcaac
cacgcccagggcgtggcactggccgcgcaggagctgcacgtggatgccaccatcgtcatg
ccggccgtcacgccggatatcaaggtccaggccgtgcgccgccgcggcgcgcgcgccatc
ctccacggcgacaacttcgatcaggccaagacccgcgcgctgcacctcgcggctgagggc
tccaagctcttcgtcccgccgttcgaccacccggacgtcatcgcgggccagggcaccgtc
ggcctggagctcatccgccagatcgcccacgtggacgttgtctttgtacctgtcggcggc
ggcggactgatcgccggcatagctacggtgctcaagcgcctgcgtccgcacgtcaaaatc
gtcggcgtcgagccggaggacgccaacgccatgtacgagagcttgcggaagggcgagcgc
gtcaagttggacaccgtgggcacgtttgcggacggcgtcgccgtcattgaggtcggtgtc
gagacgtttcgcctatgccgcgacctcgtcgatgaggtcgtgctggtgagcacggacgag
atctgcgccgccatcaaggacgtgtttgaggacacgcggtccatcctggagccggcgggc
gcactagcagtggcgggcgccaagaagtgggtcgcgcgggagcgcgtcacggacaagcag
ctggtggcggtgacgtcaggggcgaacactaacttcgaccgcctgcgccacgtgagcgag
cgcgcggagatcggcgaagggcgcgagggcgtcttcgcagtgaccatcccggagaagccc
ggggcgttccgcgcgctgatctcggcgctcgggcccgagcagagcatcaccgagttcaac
taccggtaccgcagcaacgccgaggcgcacgtgttcgtggggatgaaggtggcgtcgcgc
aatgacagggcgatgacggcgatcgacctcacggacgacgagatggccaagctgcacatt
cggcatctcgtgggcgggcatgtggcgtcgggcgatatcgaggaagccgtgttccggttt
gagttccccgaacggccgggcgctttgctgcggttcttgcgcaagctgccggatgagttc
aacatcactatgttccattaccgcaaccacggggcggatgtggggcgtgtgctggtcggg
ttttccagcgtgaggaagggggaggagtggaagaaggcactggaagaatttgtcgagggg
ctggggtaccagtgcgtgagggaggacgagaacatcgcgtacaagttgttcctggggaag
cggtcgtga
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