KEGG   Chondrus crispus (carragheen): CHC_T00007752001
Entry
CHC_T00007752001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHC_T00007752001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccp03032]
    CHC_T00007752001
Enzymes [BR:ccp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     CHC_T00007752001
DNA replication proteins [BR:ccp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CHC_T00007752001
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CHC_T00007752001
SSDB
Motif
Pfam: Dna2 AAA_11 AAA_12 AAA_30 AAA_19 UvrD-helicase nSTAND3 Herpes_ori_bp ResIII SLFN-g3_helicase SRP54 UvrD_C_2 AAA_16 AAA_22 Helicase_RecD T2SSE NPHP3_N DnaB_C FtsK_SpoIIIE AAA_25 NACHT Mg_chelatase RuvB_N AAA CbiA
Other DBs
NCBI-GeneID: 17319229
NCBI-ProteinID: XP_005711512
UniProt: R7QU31
LinkDB
AA seq 1048 aa
MSAVAPNPLPVGPARASSARLLVLEAVPHPDSKVLRTVDTITGKQLSVALCDEWMHSNVN
QNDIVRVLLTRPDGSYLPWDSAPVDEQHPVFVTRDNHLFVHHPDTLVSGTSIADSFLCLR
KSLLTARVPPRSILQSTGGEAALFGSMIHDLFQNLLAIRTLDALDVYESVEIILQQHLED
LYAAKISDADARLVLHNVIPSIMEWFKGFARLDGGENSAGVKVTGGKQTYSMGIGDVYDI
EELVWSPIFGLKGKIDASVILCSNDEAGGIGVVELKTGSSVGYASVSHSAQVNLYNLLMS
DRYSKHTKGNFTRHPNNKAVSYVRGEVVGLLMQRNEFASYARFDSDFRRLPPLLQGREDL
CAKCFANDTCMIQHKLLENGSSETVKGGPGPGLFREKAMHLTDEHAAYYMFWRRVLADEE
AHAARPQNEVWNMRGSQREALGRCLSNLRMVEDSAGSQDGRVNYLLPPGQRMTVTFQRHH
GDALQAPLNDAALAENDFVLVSAESLNTSAGSSQQSIFTWQSALTNGFIQSTSPSSVAVV
IDRSLFAWARNQAVNVNDIIWRIDSVEIHSSHNTAKRTLENLFCCDETTDLGRLRGLVVD
GTRPRLTEFIIGSQSTTVLKKEFNVTLNDDQDRALQMALRTRDYLLVLGMPGTGKTTTLA
AIVLAYASQGKSVLLCSHTNSAVDNLLQRLLAAGFRDFVRLGRNKRVISKAIHPYHISTL
TADASTTKHLETVLEQPKVVATTCLGINHPLLLRRGRFDLVVVDEASQVLQPICLGPLQF
AAGPFILVGDHYQLPPLLRAQQANESIVVVRNAMDASQACNGTPAIRLNPENQRNESLFR
RLCEFHPEAMISLSQQYRMSSEIMRLSNELVYSGSLSCGSEEIANQRLVTSLAAMEGKAS
WLQAILDQSRAVIFLDMPEDCTEDKEPTKNPEKLEKLEASRRNNLREAGVVCKCVSALEQ
GNGMLDTNVYTIDQYQGRDSDCVIVSFVRCSGSVGPLLKDWRRVNVALTRAKQKLILVGC
SKTLAKGSHFLRGMITLLENTQSVVPVS
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgagcgccgttgcacccaaccctctgcccgtgggcccagcgcgcgcgagctccgcccgg
ctcctcgtgctcgaggctgtcccgcatcccgactccaaagtcctgcgcacggtggacacg
attacgggcaagcagttatccgtcgccctgtgcgatgaatggatgcactccaacgttaac
cagaacgatatcgttcgcgtcctccttacacgcccagacggctcctatcttccctgggac
agcgcccccgtcgacgagcagcaccccgtcttcgtaactcgcgacaaccacctcttcgtt
caccacccggacaccctagtgtccggcacctccatcgccgactcgttcctgtgcctccgt
aagtcgctgctcacggctcgcgtcccgccgcgcagcattctccaatccacagggggcgaa
gccgcgcttttcggttctatgattcatgatttgtttcagaatcttttggcgattcgcact
ttagatgcgctagatgtgtacgagtccgtggagatcattctgcagcagcatttggaagat
ctttatgccgctaaaatttcagatgctgatgcgaggctcgtgctgcataacgtgatcccg
tccatcatggaatggttcaaagggtttgcgaggcttgatggtggcgagaattctgcaggc
gttaaggtcacgggcgggaaacagacgtacagtatgggtatcggcgacgtttatgatata
gaagagctcgtctggagcccaatattcggacttaagggcaagatcgacgcttccgtcatc
ctgtgtagcaacgacgaggctggtggcattggcgtcgtggaattgaagaccggctcatca
gttggctatgcatctgtatcgcactcggcacaagtgaatttgtataatttgctcatgtct
gatcgctatagcaagcataccaaaggcaacttcacgaggcacccaaataacaaagccgtg
tcgtacgtcagaggtgaagttgtcgggcttctcatgcagcgtaacgaatttgcgtcatac
gcgaggtttgattcggatttcaggagactgccacccttgctgcagggtcgggaagatctt
tgcgcgaaatgctttgcgaacgacacttgtatgattcagcacaagcttctggagaacgga
agtagcgagactgtcaaaggcggaccgggaccaggtctttttcgggaaaaggccatgcac
ctgactgacgaacatgctgcgtattatatgttttggagacgtgttctagcggatgaggaa
gcacatgctgcaaggccacaaaatgaagtgtggaacatgcgcggctcgcagagagaggcc
cttggaaggtgcctgtcaaatcttcgtatggtggaggattccgccgggagccaggacggc
cgagtcaattatctcctacccccagggcagcgaatgactgtaacattccaaaggcatcat
ggcgatgcgttacaggcccctctgaacgacgctgcgcttgccgaaaatgattttgtcctt
gtatcagcagaatcgttgaacacatccgctggaagctctcagcagtccatatttacatgg
caaagcgcgcttacaaatggattcattcagtctacctctccttcgtcagtggctgttgtt
atcgatcgaagcttgttcgcatgggctcgcaaccaggcagtcaatgttaacgatattata
tggcgcatcgacagtgtagaaatacattcgtctcataacactgcgaagaggaccttagag
aatctcttctgctgtgatgagacaactgatttaggacgcctgagaggcctagtagtggat
ggcacccgtcccagattgactgagtttatcattggaagccagtcgacaactgttttaaag
aaggaattcaatgtgactctcaacgatgatcaggatcgagctttgcagatggccttgcga
acaagagactatctactcgttctcgggatgcctggaactgggaagacaacaactttggct
gcaattgttctcgcatatgcttcacaaggaaagtcggtcctcctttgttctcacacaaac
tcagccgttgataatcttcttcaaagattattggcggctggattccgagactttgttcgc
cttggaaggaataagagggtaattagcaaagcgatccatccataccacatttccacgctg
acggccgatgcgtcaacgacaaaacacctcgagactgtacttgaacagcctaaggttgta
gcgacaacttgtttgggcattaatcatcctctccttcttcgcagaggacgctttgatctt
gttgttgtggatgaggcatcgcaggtgttgcagcccatatgtctcgggccattgcaattc
gctgccggtcccttcatcttggtcggagatcactaccaactgcctccacttttgagagcg
cagcaagcgaacgaaagtattgtggtggtaaggaatgccatggacgccagccaagcctgt
aatggtaccccagccatcagattaaacccagaaaatcaaaggaatgagtctctatttcga
aggctctgtgaatttcatccagaggcgatgatcagtctatcgcaacagtatcgcatgtca
tcggaaatcatgaggctgagcaatgaactggtgtacagtggaagtctttcctgcgggtca
gaggagattgccaaccaacgtcttgtgacttcccttgcagccatggaagggaaggcctcg
tggctgcaagccattctggatcaatccagggctgttatcttccttgacatgccagaggac
tgcaccgaagacaaggagcctaccaagaatccagaaaaactcgagaaacttgaagcctca
cgaagaaacaatttgcgagaagcaggcgtggtatgtaaatgtgtttcagcgctggagcag
ggaaatggcatgttggatacgaatgtgtacactattgaccaataccagggaagagacagc
gattgcgtgatcgtatcttttgtgcgatgctctggttctgttggtccgttgcttaaagat
tggcgacgagttaacgttgcgctcacgcgggcgaagcagaaactaattctcgtgggttgc
tccaaaactttggcgaaaggcagtcactttctacggggcatgatcacgcttcttgaaaac
acacagagcgttgtccctgtatcgtga

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