Chondrus crispus (carragheen): CHC_T00007835001
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Entry
CHC_T00007835001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
17319330
NCBI-ProteinID:
XP_005711613
UniProt:
R7QT59
LinkDB
All DBs
AA seq
929 aa
AA seq
DB search
MVAIATPAAAPPLSGIVKAVPSADTLVLMNPAPPTTGPPPEMRVTLSSLKAPLLSRDGQS
DEPFAWHAREWLRARLINTRVSFRIDYRLPAIHRVFATVTPAAADTSLNLQAVEQGMARV
RRPNNDAEDRSPEFDQLCAAEEKALAARKGLHAGGDAPKSRNLPNPSDTVLEAQDFVNAC
KGKLIKGIVDYIINGSAVKVLLTGVPHASVDSLGDRLVTLCLSGVQCPGFRRSDGADPAT
PPQPMPFAVNAKFLTELRLLHRDVNVTIDGVDRNGMLFATIEDPKASMHIGEELLKSGFA
KTVSWSIDLSARAPALRAAERSARDRQMGVWKGFKPPTSNPELFTGKCVEVVSGDMIAVL
DDTSGTVRRISFASVRANRPDRATRDRAFMPIGPVADAKEALRKKLIGRRVRVKVEYTRA
PSEDSVRKDTMAFATVGREGDKKNPDVALQLISAGLLGVMRHRGDEGRAANYEEYLEREK
AARDAKKGIHGDVQSTTRRINNLTGPDAKKRSRDVLSGLQRNGPYKAIVEYVSSASRYRL
YLPTEAMLITLALRAVRCPQSSRKVYAPDGSLREETPGEPHGDEAADFAREHLMQRDVEV
SVYNVDRIGAFLGNIQVVSPSGEKTDVSAMLLEEGHGYLHESFDPSRDPSGSRYVSVEKT
AKDAKKGAWSDYVEPVVADKSAPQSSDAPRKTYSGQVCEIGFGGRIFVQNSDTTKAALAS
VESGLASLSLDAAPASPVTGLRPGTVVAGKFSADNRWYRGKVLYVNKNGEVDVRFIDYGN
EEKLTAKSIRRFGVAVGFISAAPIAVEVVLQHIVIPGAEDPCGVAAGEYLKDLVFDKDIT
VSIATTEGPGKVIGDILIPVAGSSDSAAKPTSVIEEMLKSGLARIVRKTDRASKAAFKKL
RPFEEIGIATRQYLWNYGEAFESDCDEEQ
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccatcgccacgccggccgccgccccgcccctgtcggggatcgtgaaagcggtc
ccgtccgcggacacgctcgtgctgatgaacccagccccgccgacgacgggccctccgccg
gagatgcgcgtcacgctatcgagcctcaaggccccgctgctgtcgcgcgacggccagtcg
gacgagccgttcgcgtggcacgcgcgcgagtggctgcgcgcccgcctcatcaacacccgc
gtctcgttccgcatcgactaccgccttccggccatccaccgcgtcttcgccaccgtcacc
cctgccgccgcagacacttcgctcaacctgcaggccgtcgagcagggcatggcccgcgtc
aggaggcctaacaacgacgccgaggaccgatcccccgagtttgaccagctctgcgccgcg
gaggagaaggccctcgccgcgaggaaaggcctgcacgctggaggcgacgccccgaagtcg
aggaacctgccaaacccttcggataccgttcttgaagcccaagattttgttaatgcatgc
aaaggcaaacttatcaaaggcattgtcgactacatcatcaatggttctgcagtcaaggtc
cttctcacaggtgtgcctcacgcatccgtagactctctaggagatcgtctcgtcaccctc
tgcctctcaggtgtccaatgcccaggctttcgcagatcagatggtgcagatcctgccacc
ccaccacaaccgatgcccttcgctgtcaatgcaaaattcctcaccgaactacgtctcctc
caccgcgacgttaatgtcaccatcgacggagtcgatcgcaatggtatgctctttgccact
attgaggatcccaaagcctctatgcacattggtgaggagcttctcaagtccggctttgca
aagaccgtcagttggagcatcgacctctcagctcgagcccccgccctccgcgccgctgag
cgatccgccagggatcgacaaatgggcgtctggaagggcttcaagcctcctacttccaac
cccgaactctttaccggcaagtgtgtcgaggtcgttagcggtgatatgatcgctgtcctc
gatgacacctctggcaccgtccgcaggatttccttcgcctcagtgagagccaaccgacct
gaccgtgctacacgtgatcgtgccttcatgcctattggccccgtcgcagacgccaaggaa
gctctgcgaaagaaactcatcggcaggcgtgttcgcgtcaaagttgagtataccagagca
ccatccgaggattcagtccgcaaggataccatggcatttgcaaccgttggtcgcgaaggt
gacaagaagaatcccgacgtcgcactccaactcatttccgctggtcttcttggcgtcatg
cgtcatcgcggtgatgaaggacgagctgccaactatgaagaatacctagagcgcgaaaag
gccgcaagggacgccaagaaaggtatccacggcgatgtccaatctactaccaggaggata
aataaccttactggtccagatgccaagaaacgatcccgtgacgttctctctggcctacag
cgcaatgggccatacaaggccatcgtcgaatatgtttcgtctgcctctcgataccgcttg
tacttgcccacagaagctatgcttatcactttagcactccgcgcagtccggtgtccccaa
tcatcgcgcaaggtgtatgcaccggatggttcgcttcgtgaagaaacaccaggagagcct
catggtgatgaagctgctgattttgcaagggaacacctcatgcaacgcgacgtcgaggta
tcagtctacaatgttgatcgtattggcgccttccttggtaacatacaggttgtcagtccg
tcgggtgagaagaccgatgtatccgctatgcttctagaagaaggacacggatacttgcat
gagtcgtttgacccgtccagagatccctctggctctcgctatgtctcagttgagaagacc
gccaaggacgccaaaaagggagcttggtccgattacgttgaaccagtcgttgcggataaa
tccgctccccagtcatccgatgccccacggaaaacatattcaggccaagtctgtgagatt
ggtttcggtggccggatatttgtgcaaaacagcgacactaccaaggcagccttggcctct
gtcgaatcgggtctcgcgagcttgtctttggatgcagcaccagcgagtccggttactggt
ttgcgccctggaacggttgtcgcgggcaagtttagtgcagacaatcgttggtatcgtggc
aaagtcttatacgtcaataagaacggcgaagtcgacgtgcggttcattgactacggcaac
gaggaaaagttaactgccaagagtattcgacgattcggagttgctgtaggctttattagc
gccgccccgatcgccgtcgaggttgtcctgcagcacattgtgattcctggtgctgaggat
ccgtgtggagtagcagctggtgagtatctgaaagacctggtgtttgataaggacatcact
gtctctatagccacgacagaggggcccgggaaagtcatcggggacatcttgatccctgtt
gcgggaagttcggactcggctgcaaagccaacgagtgtgattgaagaaatgctcaagtct
ggtcttgcccgaattgttcgcaagacggaccgtgcgtcgaaggcagctttcaagaagctt
cgtccgtttgaggaaatcgggatcgctacgaggcagtacctgtggaattatggagaggca
tttgaatccgactgtgacgaagaacaataa
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