Chondrus crispus (carragheen): CHC_T00007974001 Help Entry CHC_T00007974001  CDS       T02916                                  Name (RefSeq) hypothetical protein   KO K15710   E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.- 2.3.2.27] Organism ccp  Chondrus crispus (carragheen) Brite KEGG Orthology (KO) [BR:ccp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:ccp04121]     CHC_T00007974001 Enzymes [BR:ccp01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      CHC_T00007974001 Ubiquitin system [BR:ccp04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     CHC_T00007974001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom SHPRH_helical-1st Helicase_C SHPRH_helical-2nd zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4 Motif Other DBs NCBI-GeneID:  17320049 NCBI-ProteinID:  XP_005712353 UniProt:  S0F3K3 LinkDB All DBs AA seq 1321 aa AA seqDB search MLSRELGPPLDLRNPVEWEDARRLAGSCPLNDQQSVRVQAHVTLDVVHGTIERAEVRDEQ EAPEGDGCRGGLLCDEMGLGKTVELMQLVLCNTFKPHALNGKVKGLPEVRDNDRCMECEG DVSERDQYSTCLECGGNLHEECTRMNFERVDSEGFVCKSCHSSMERLLRANTPLSQLPKS KATVVVIPTTLLLQWKREVEKHVREALTVEVYQGHKKGYMPLTRLMKADVVLVTYDALKD DVHTFNALRNPRRGLRHAKVHHPIPLPLLSVRWHRVAWDESQMLGATGVSQAAQLAKYLH ATYRWCVSGTPMTHCIREAIPMFDILQVQDGRNFVDWSSYFTPSFLVEDEKRLRKALRAV MWRSSKDDVNDDELGLPPQVTEVVHTSFGPVERYHYSSLQEKVKTATAKLPVGADTRSRT ISSDLLTMLRQACCHPQIGISGRKLMSRLARQALGPSGAKALTRYDAASQAMKRAESPLD MNEVLHALVTKAQAECAEALRSFVASANGLAATCWLQQSILSSSSAGVDGIVSAIQLYRE TLGLVEENKNVVQMDTIQRMHILFNLNEALDSVESTRKKVSGLPISNAERQNALSQLSSL GRTLRDEDLLYEVNKLKQDYVAEAQAQLVAADASFKELASKLGREPLMVQEKDYETEDDF ETAVPAGVYVKPNTTTMYWWDVAVSVVLEKEQKKRESFVDRVIRKLLDAIPGGGLNVRTL AHRLSSIHSFTVIIPPEIAKLQHARDKLHKALREMPGSVPPSQAQIAESGQCRECREFGI GPPCSHCRAEHLFEDVERRLYALRENDTSADFVLGGEEERVERTPCPDETEADAKAIVDG ALRPKSRVNNFAQNAGGLRFQSELETILKSLSLVAKEAGDSKLDKRISQWFDGFQLMKKE HAEARAVFEAQRSYLARMDEVNMALMRLSVLGRDEDLSSLSVDQQRHRVPRESLSTLNVE FSSEKAVAEGDFRGKRGNLVFLQSLQKSSEGETTAGDEVVTRGACAVCLGEFDDSVTEVA LFACGHILCCQCTLLMIKGADAKSRVSSIRCPTCRVKCSVAEINFTRSAGCKMRENSAST EGEQGESDGSSESGVEEDSVVVGKRKRGRRDVEGRRCKARKVTERDSTFYDGSAAVVGLI GAKASGVVRTLRGIWQQDGCAKVIIFSEWSEVINVVSRALRMNKISHRNGAQTTRALEFA RMISEFRVGKAAGVLLLPLKKAAAGLNLTEARHVVLMEASMDVSMESQAVGRVHRIGQEG ETFVHRMVMKDTIEECVLRFGDAFRGASRCEAERSVRLEDVIGEICQGQGRGGGKDYEVV Q NT seq 3966 nt NT seq  +upstreamnt  +downstreamnt atgctgtctcgagagctaggcccccctttggatttgcggaaccccgtggaatgggaggac gcgcgacgcctcgcggggagctgcccgttgaatgaccagcagtccgtccgggtccaagcg cacgtcacgctggacgttgtgcacgggactattgagagagcggaggtgagggacgaacag gaggcgccggagggagatgggtgtagaggcgggttattgtgcgacgaaatgggactgggc aagacggttgagctcatgcaacttgtgctttgcaacacgtttaagccccacgccttgaac ggcaaagtgaaaggtttgcctgaggttcgcgacaatgacagatgcatggaatgcgaaggc gacgtgtcggagagagaccaatacagcacatgtcttgagtgtggtggaaacctacacgaa gagtgtacacgaatgaattttgaaagggtggatagcgagggcttcgtctgcaagtcatgt catagttcaatggaaaggctgctaagagctaatacaccattatcgcaacttccgaagtcc aaggcaacggtcgtcgtcatcccaacgacgctgctcctgcaatggaaaagagaagtagag aaacacgtcagagaagcgctgacagtggaggtttatcaggggcacaagaagggatacatg ccattgacgaggttgatgaaggcagatgtagtcttggtcacatatgatgcattgaaggac gacgtgcacacgttcaacgctctccgaaacccacgacgaggtttgcgacacgccaaagta caccacccgattcctcttccccttttaagcgttcggtggcacagagtggcttgggatgaa tcccaaatgctcggcgcaacaggtgtttctcaggctgctcagttggccaagtatttgcac gccacttatcgttggtgtgtgtctgggaccccgatgacgcactgcatccgagaggcaata cccatgtttgatatactgcaagttcaggacgggaggaattttgtcgactggtcctcctac ttcacgcccagtttcctcgtggaggatgaaaagagattgcgaaaggccttgcgagctgtg atgtggagatcctcgaaggacgatgtaaatgatgacgaacttgggcttccgcctcaagtc actgaagttgtgcacacgtccttcggtccggtcgagcgatatcattactcttctctgcag gagaaagtcaaaacagctactgcaaagttgccggtaggagcggacacgcgctcacggacc atctcgtcggaccttttaacaatgctgcgacaggcgtgttgtcaccctcaaatcggtatt tccgggagaaaactgatgtctcgattagcgcgacaggctctcggaccatctggcgcgaag gccctcacacggtacgacgcagcatcgcaggcaatgaaacgagccgagtccccactcgat atgaacgaggtgctccatgcgctagtgacgaaggcacaggctgagtgcgcagaggcactg cgaagtttcgttgcctctgcaaacggccttgcggctacctgctggctacagcaatcaatt ctttcatcatcatcagcgggagtggatggaattgtttctgccatacaattgtatagggag accctgggtctggttgaagaaaacaagaacgtcgtgcagatggacactatccaaaggatg catatcctgttcaatctgaatgaagctctagattctgtagaatcgacgagaaagaaagtg tcaggtttaccaatttcaaatgcagaaaggcaaaatgccctctctcaactcagctcgctt gggcgaactcttcgagacgaagacttgttatacgaggtcaacaagttgaagcaggattac gttgctgaagcccaagctcaactggtagctgcggacgcatcattcaaagagctagcgagc aaattgggtcgcgagccgctcatggttcaagagaaagattatgagacggaagacgatttc gagactgctgtacctgctggggtatatgtcaagcctaacacgactacgatgtactggtgg gatgtagccgttagcgttgttcttgaaaaggagcaaaaaaagcgggaaagctttgtggat cgcgtgatacgcaagttgctggacgccattccggggggagggttgaatgtcagaactctt gcgcataggctgtctagcattcattcctttactgttattattccccccgagattgcgaaa ctgcaacacgctcgagacaaactgcacaaggccttgcgtgaaatgccaggttcagtgcca ccctcgcaggcacaaattgccgaatcaggtcaatgtagggaatgtcgtgaatttggaatt ggccctccttgcagtcattgtcgagctgaacatctgtttgaagatgttgaaagacgacta tacgccttgcgggaaaatgacacctcagcagactttgtattgggtggcgaagaagaacgt gtggagcgcactccttgccctgatgagacggaagcagatgcaaaggcaattgtagatggt gcattacgaccaaaatcaagggtaaacaactttgcgcagaacgccggcggtctacgcttc caaagcgagctggagacgattctcaagtcattatcactggttgcgaaggaagctggggac agcaaacttgataagagaatatcgcagtggtttgatgggtttcaactgatgaaaaaagag cacgcagaagctcgtgctgtgttcgaagcgcagcggtcgtatcttgcgagaatggatgaa gtgaatatggcgctgatgcgactctctgtgcttggacgcgacgaagacttatcctcactt tcagtggaccagcaacgacatcgggtgccacgcgaaagcctcagtacgctcaacgttgaa ttttcaagtgaaaaggctgttgctgaaggtgatttccgggggaagcgtgggaaccttgtc tttttgcagtcgcttcaaaaatccagcgagggggaaacgacagctggagatgaggttgta acaaggggagcttgtgccgtttgcctcggggaatttgatgactcggtaacggaagttgcc ctgtttgcttgcggtcatattctatgttgccaatgcacgctgctgatgatcaaaggagcg gatgcaaagtcaagagtatcaagcattcggtgcccgacatgtagggtgaaatgctcggta gcggagattaatttcacgcgcagcgccggttgcaaaatgcgggagaactcggcatcgaca gagggggaacagggtgaatcagacggtagcagtgaaagcggggtggaggaagactctgtg gtggtgggcaagcgtaagcgagggcgacgagatgtagaggggcgcaggtgcaaggcgcgc aaggtgacagagcgggactcgacgttctacgacgggtcggcggctgtggtggggctgatc ggtgccaaagccagcggggtggtgcgaactctgcggggcatctggcagcaagacgggtgt gccaaggtgatcatattttccgagtggagcgaggtgatcaacgtggtgtcgcgggcgctg cggatgaacaagatctcgcaccggaacggggcgcagacgacgcgagcgctggagtttgcg cggatgatcagcgagttcagggttggcaaggcggcgggcgtgctgctgctgccgctgaag aaggcggcggccgggctcaacttgaccgaggccaggcacgtggtgctgatggaggcgagc atggacgtgtcgatggagagccaggccgtcggcagggtgcatcgcatcgggcaggagggc gagactttcgtgcataggatggtgatgaaggacactatcgaggagtgcgtgctgaggttt ggagacgcgtttcgcggggcgagtcggtgcgaggcggagcgcagcgttaggttggaggat gtgattggggaaatttgccaggggcaaggacgaggcggcggcaaggattacgaagttgta cagtag

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