Chondrus crispus (carragheen): CHC_T00008031001
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Entry
CHC_T00008031001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ccp
Chondrus crispus (carragheen)
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccp03009
]
CHC_T00008031001
Enzymes [BR:
ccp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
CHC_T00008031001
Ribosome biogenesis [BR:
ccp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CHC_T00008031001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
17319644
NCBI-ProteinID:
XP_005711927
UniProt:
R7Q0T5
LinkDB
All DBs
AA seq
821 aa
AA seq
DB search
MGGTGRARRRKRAEELGTGLEHTGHNPGVAEGAGQRQRVRRRRLEYQLKKSDRDTEGVEV
VPKNGKREKKTRAPVFSDENKKWLKVKSTSNHDEEEEEEDVESHEANGHSKETANGHPES
PASSEDEEESENDSQSSQEDLATPGNGTTELLDSEEDDDEEDNQDDDDDDDDEDSDSDSS
LPPDNLEMASQRILQERLREAGEADAEMQDERERAEKEDAGFKLKSGALGRGGRDEDAIM
GATREELMLRIRGILHVLADFKTRREPDMARSDYVDALRETICTCFGYNEELAEMLMDVF
PGADIVDFMEASESPRPLTIRTNTLKTRRRQLAEALITRGMNVDPIDKWSAVGLVVYDSS
VPVGATPEYLAGHYMIQSASSFLPVVALAPQQNERVIDMAAAPGGKTSYIGAVMKNTGTL
VANDLKRGRIKSLVSNIHRLGLKNAVVSNYDGLQIPKIFGHSFDRALLDAPCSGSGIISH
DAAVKMNRRRKDVENTTRIQKELILAAIDSVNSKSKTGGYIVYSTCSVLVEENEAVVDYA
LRKRDVKVVEAGISFGVPGFTKMRKHRFHPSLTNSRRIYPHIHNLDGFFVCKLKKMSDRT
TNRKNDEQIAHEGPGNVKSVPVKGHKGSPQDSTRAGTSATIDGEELRIKPSGLVSKADAN
AEKIRDVQPSPKVSRGRGNLIETNQQPKSALMAKRKIDSDNDPAEVDNGNRADDSARKLS
KKKKSIEKDLQPQTPSKKKRKTVAGSSNEAQESPSRSAAEAKQTRSTQEPAAKQRASKTV
EDEEGPPEVETFDDAHALSMRKRVRSEKKRAAMRRRLGMLS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaacgggtcgcgcccgccgccgcaagcgcgccgaagaactgggaaccggtctt
gagcacacgggccataatcccggtgtcgccgaaggggcaggccagcgacaacgagtccga
cgtcgccgtttggagtatcaactgaagaagagcgatcgtgatacagaaggtgttgaggtc
gtaccgaaaaacggtaagcgggagaagaaaactcgtgccccagtcttttcagatgaaaat
aagaaatggctcaaagttaagagcacttcgaaccacgacgaagaggaagaagaggaggat
gtcgaatcccatgaagcgaacggccattcgaaagagaccgcgaatgggcaccctgaatcg
cctgcctcttcggaggacgaagaagaaagtgagaatgacagtcagtcatcacaggaagac
ctcgctactccaggaaatggcaccacggagctactggactcagaggaagacgacgacgaa
gaggataaccaggacgacgacgacgacgacgacgacgaagattccgacagtgacagcagt
ctacctcccgacaaccttgaaatggcatcgcaacgcattcttcaagagcgacttcgtgag
gcaggtgaagcggatgccgaaatgcaagatgaaagagaacgtgcggagaaggaagacgct
ggatttaagctcaaatctggagcattaggccgtggtggtagagacgaagatgcgattatg
ggagcgacacgagaagaacttatgcttcgcattcgtggtattttgcacgtcttggctgac
ttcaaaacccgccgcgagcctgacatggcccgttctgactacgttgacgctctacgagaa
accatctgcacgtgctttgggtacaacgaggaacttgcagaaatgctcatggatgtcttt
cccggtgcagatattgtcgacttcatggaggcgtcagaatctccgagaccactaacaatt
cgaacaaatacgctcaagactagacggaggcaacttgccgaggctctcattacccgaggg
atgaacgtcgatcctattgataaatggtcagccgttggccttgtcgtttatgactcgtca
gttccggtcggtgcgactccagaatatctggccggtcactacatgattcaatcagcatca
agcttcttgccagtggtcgcgcttgcaccgcagcaaaacgaacgagttattgatatggca
gcagcgcccggaggcaagacttcatacataggtgccgttatgaagaatactggtaccctt
gtcgcgaacgatctcaaaaggggccgaatcaagtcactggtttcgaacattcaccgtctc
ggcctgaaaaatgcggtcgtgagcaactatgatggtcttcagattcccaaaatatttggc
cacagcttcgatcgagcgcttcttgatgctccatgttcgggatctggaatcattagccac
gacgcagctgtaaaaatgaatcgtcgcaggaaggatgtggagaataccacgcgaattcag
aaggaattgatactcgccgccattgattcggtaaactcgaagtcgaaaacgggtggttac
attgtgtattctacatgctcagtcctagtggaggaaaacgaagcagtagtggactacgct
cttcgcaagagagacgttaaagttgttgaggccggtatctcattcggagtgcctggtttc
accaaaatgcgcaaacacaggtttcatccgagccttacaaactcgcgtcgcatataccca
catatacacaacttggacggtttctttgtttgtaagctcaagaagatgtcggacagaaca
acaaacagaaaaaatgatgaacaaatcgcacatgaagggcctggcaacgtaaagtcagtt
cctgttaaagggcacaagggctcgccgcaagattcgacgagagcaggtacatcggctact
atcgatggagaagagttgcgcattaagccttccggtcttgtaagtaaggctgatgccaat
gcggaaaaaattagggatgtccagccttcaccaaaagtgtctcgaggtcgtggaaatttg
attgagacgaatcagcaaccgaagtccgctctaatggctaagagaaagattgattctgac
aatgatcccgccgaagtagataatggaaatagggctgatgactccgcgcggaaactctcg
aaaaagaaaaagtcgatagagaaagatttgcaaccgcaaaccccttcaaagaagaaaagg
aagacagttgccggatcttcaaacgaagcgcaggaatctcctagtcgttccgccgcggaa
gcaaaacaaacacgttcaactcaagagcctgctgcgaagcagcgcgccagtaagacagtt
gaggatgaggaggggccaccagaggttgaaacatttgatgacgctcacgctttgtcgatg
cgaaaaagagtgagatctgaaaagaaacgggccgctatgagacgacgtcttggtatgctg
tcatga
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